Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_K10
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC090999-15|AAK26154.1| 231|Caenorhabditis elegans Hypothetical... 66 3e-11
AC090999-16|AAP46261.1| 304|Caenorhabditis elegans Hypothetical... 55 5e-08
AF039711-9|ABS19467.1| 281|Caenorhabditis elegans Temporarily a... 49 3e-06
AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p... 34 0.11
Z68316-1|CAA92680.1| 213|Caenorhabditis elegans Hypothetical pr... 32 0.42
AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine re... 30 2.3
>AC090999-15|AAK26154.1| 231|Caenorhabditis elegans Hypothetical
protein Y82E9BR.14a protein.
Length = 231
Score = 66.1 bits (154), Expect = 3e-11
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)
Frame = +1
Query: 136 MAXSTQHTIVCFEXVKSFPPVVN-GKINLVSFLEAATDLVYLVERLGTAFAPVKFDMQGN 312
+A S H + FP + + GKI FL A + V LG F+ V+ D+QGN
Sbjct: 15 VADSPGHETYFAKPEHFFPHLTDDGKIPTAQFLSACQGIADFVSFLGATFSLVRKDIQGN 74
Query: 313 IDRIKKNYKFDENSCLLMLMLEEI----NNGKAPV-TEGVLWLNRALLFFELVFVDIL-- 471
+D+++ ++ D+ + L + + GK + TEG+LWL R L F + +++
Sbjct: 75 VDKVRVRFEKDQEGQKYLQQLIDADLAEHGGKFGIATEGLLWLKRGLQFMLELLTEMVTA 134
Query: 472 --ENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMIKS 624
L K ++ AY S+K++H ++ +Q F + P Q++K+
Sbjct: 135 YNSGLPRDKTEDLSGAVATAYGKSLKRHHGFIAKQAFKVVTMAVPYRRQILKA 187
>AC090999-16|AAP46261.1| 304|Caenorhabditis elegans Hypothetical
protein Y82E9BR.14b protein.
Length = 304
Score = 55.2 bits (127), Expect = 5e-08
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Frame = +1
Query: 268 LGTAFAPVKFDMQGNIDRIKKNYKFDENSCLLMLMLEEI----NNGKAPV-TEGVLWLNR 432
LG F+ V+ D+QGN+D+++ ++ D+ + L + + GK + TEG+LWL R
Sbjct: 133 LGATFSLVRKDIQGNVDKVRVRFEKDQEGQKYLQQLIDADLAEHGGKFGIATEGLLWLKR 192
Query: 433 ALLFFELVFVDIL----ENLQAKKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMSP 600
L F + +++ L K ++ AY S+K++H ++ +Q F + P
Sbjct: 193 GLQFMLELLTEMVTAYNSGLPRDKTEDLSGAVATAYGKSLKRHHGFIAKQAFKVVTMAVP 252
Query: 601 TFAQMIKS 624
Q++K+
Sbjct: 253 YRRQILKA 260
>AF039711-9|ABS19467.1| 281|Caenorhabditis elegans Temporarily
assigned gene nameprotein 296 protein.
Length = 281
Score = 49.2 bits (112), Expect = 3e-06
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Frame = +1
Query: 145 STQHTIVCFEXVKSFPPVVNGKINLVSFLEAATDLVYLVERLGTAFAPVKFDMQGNIDRI 324
ST IV V++ P V + L++F+E +L + LG F V+ D++ ID +
Sbjct: 77 STDVIIVEKSDVENCPEVTPDDVELLTFVEVYEELCKFIGMLGKIFEFVEKDVREKIDLL 136
Query: 325 KKNYKFDENSCLLMLMLEEIN-----NGKAPVTEGVLWLNRALLFF-ELVFVDILENLQA 486
K+ + + ++ L NGK +L LNRAL F E ++ + A
Sbjct: 137 KELHTANPEGYKTVVALVHSEKPMEKNGKESGAVAILHLNRALEFIVEFMYAAVA----A 192
Query: 487 KKEINMKYVFTKAYEGSVKKYHSWVTQQLFIFICKMSPTFAQMI 618
+ ++ + + Y+G++ K+H W+ + PT +M+
Sbjct: 193 TNDDSIPKICKECYDGTLAKHHPWIIRTAVKVAVYTLPTREKML 236
>AF039053-16|AAC25869.1| 497|Caenorhabditis elegans Cytochrome p450
family protein 33C1 protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 568 QLFIFICKMSPTFAQMIKSFGVDGDIKSF-ETKLASFNITLHLNRCKIDDFFKDNN 732
+L IF+ P FA+++ +G IK+F +T LA FN + +R +ID F+D N
Sbjct: 209 KLHIFLAMNIPIFAKLLPESLYEGPIKTFRDTTLAFFNKQIEAHRHRID--FEDLN 262
>Z68316-1|CAA92680.1| 213|Caenorhabditis elegans Hypothetical
protein K08E4.2 protein.
Length = 213
Score = 32.3 bits (70), Expect = 0.42
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Frame = +1
Query: 196 VVNGKINLVSFLEAATDLVYLVERLGTAFAPVKFDMQGNIDRIKKNYKFDENS--CLLML 369
+ N ++L +L + ++ GT F+ V D+ ++++ + D +S ++ +
Sbjct: 22 IENDNVDLEQYLLFWEHVCNVMCSWGTIFSFVVKDVTAKLEKLTQMRSSDPDSYRTIIGM 81
Query: 370 MLEEINNG----KAPVTEG---VLWLNRALLFFELVFVDILENLQAKKEINMKYVFTKAY 528
+E NG + P G ++ LNRAL F +D+L+ + + N+ + +Y
Sbjct: 82 ATKESENGTIRNQKPNRSGTGHLMVLNRALEFV----IDLLDGVFTSNDENVSTIARSSY 137
Query: 529 EGSVKKYHSW 558
+ + + HSW
Sbjct: 138 DKHLSQLHSW 147
>AF068713-9|AAC17800.1| 284|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 68 protein.
Length = 284
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -1
Query: 351 IFIKFVIFFYSINISLHIKFYRCKSCAKAFNKVDQIRCSFQEAHQIYF 208
+F F++ F I I F C + D RCSF E + IY+
Sbjct: 125 LFAIFILIFSLIIFDQIIMFGYCGNTIDTPMNCDHFRCSFNECYSIYW 172
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,776,827
Number of Sequences: 27780
Number of extensions: 310240
Number of successful extensions: 859
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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