Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K05
         (634 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...   184   5e-49
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      36   2e-04
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.69 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   1.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   8.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   8.6  

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score =  184 bits (448), Expect = 5e-49
 Identities = 76/114 (66%), Positives = 94/114 (82%)
 Frame = +1

Query: 157 AEENCETVGSEVHVTKEEYDEMGRLLRSCSGEVSVNKCEGMCNSQVHPSISSPTGFQKEC 336
           +EE CET+ S++++ KEE+DE+GRL R C+GEV+VNKCEG C SQV PS+ +PTGF KEC
Sbjct: 22  SEETCETLMSDINLIKEEFDELGRLQRICNGEVAVNKCEGSCKSQVQPSVITPTGFLKEC 81

Query: 337 FCCREKFLRERLVTLTHCYDPDGIRFEDEENALMEVRLREPDECECYKCGDFSR 498
           +CCRE FLRER +TLTHCYDPDG+R   E    M+V+LREP EC+CYKCGDFSR
Sbjct: 82  YCCRESFLRERTITLTHCYDPDGVRLTAETVNSMDVKLREPAECKCYKCGDFSR 135


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 22/72 (30%), Positives = 33/72 (45%)
 Frame = +1

Query: 268 CEGMCNSQVHPSISSPTGFQKECFCCREKFLRERLVTLTHCYDPDGIRFEDEENALMEVR 447
           C G C S +  S S     ++ C CC+E   RE  V+L   + P   + +  E   ++V 
Sbjct: 65  CIGRCASYIQVSGSKIWQMERSCMCCQESGEREASVSL---FCP---KAKPGERKFIKVT 118

Query: 448 LREPDECECYKC 483
            + P EC C  C
Sbjct: 119 TKAPLECMCRPC 130


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.69
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 233 SNLPISSYSSLVTCTSLPTVSQFSS 159
           SN   SS S + +C+S+PT + + S
Sbjct: 92  SNPTYSSRSVMTSCSSVPTTASYGS 116


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +1

Query: 379 LTHCYDPDGIRFE 417
           LT  YDPDGI FE
Sbjct: 99  LTAKYDPDGIYFE 111


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -1

Query: 475 NIHTHRALAGELPLMRFLHLQNECH 401
           N+ TH  +    P MR LH    CH
Sbjct: 177 NLKTHMGVHRAKPPMRVLHQCPVCH 201


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 290 KYTRQFHHPPAFR 328
           KY +QFHH   F+
Sbjct: 13  KYHQQFHHQQLFQ 25


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 290 KYTRQFHHPPAFR 328
           KY +QFHH   F+
Sbjct: 13  KYHQQFHHQQLFQ 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,454
Number of Sequences: 336
Number of extensions: 2553
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)