Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K05
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141...    28   5.4  
12_02_0930 + 24508728-24508989,24509084-24509358,24510120-245103...    28   7.1  
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298...    27   9.4  

>06_01_0182 +
           1413551-1413794,1413883-1414139,1414241-1414387,
           1414487-1414804
          Length = 321

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = +2

Query: 134 ILLYPRVQLKKIVKQSEAKCM--LLKRNTTKWVDYLDHAVVK*A*TSVKECATVKYTRQF 307
           +L+   ++L  +V   + K    L  +   K+V+ LD  + K A   V++      ++Q 
Sbjct: 192 LLMNELLKLDAVVADGDVKAQRRLQVKRVQKYVETLDAVMAKNA-AIVRKSGEKLTSKQH 250

Query: 308 HHPPA 322
           HHPPA
Sbjct: 251 HHPPA 255


>12_02_0930 +
           24508728-24508989,24509084-24509358,24510120-24510396,
           24510631-24510707,24510827-24511123
          Length = 395

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -3

Query: 95  NIHLVI-TIEYLKEKYKNLRELRRLQIESSA 6
           ++HL+   IE+LK++ +  R LRR Q+E+ A
Sbjct: 81  SVHLIADVIEWLKDEVEKQRLLRRRQVEAPA 111


>02_05_0702 -
           31027908-31027958,31028062-31029311,31029665-31029842,
           31029955-31030017,31031597-31031704,31031772-31031836,
           31031928-31032015,31032104-31032157,31032234-31032380,
           31033358-31033429,31034077-31034226,31034317-31034430,
           31034762-31034875,31035925-31036077,31037437-31037529,
           31038202-31038318,31038984-31039086,31039192-31039376,
           31039448-31039522,31040451-31040534,31041547-31041588,
           31041668-31041847,31042109-31042162,31042239-31042280,
           31042869-31042967,31043040-31043174,31043325-31043427,
           31045061-31045134,31045227-31045270,31045393-31045471,
           31045592-31045705,31045842-31045946,31046027-31046161,
           31046447-31046546,31046870-31046883,31046936-31047004,
           31047079-31047182,31047299-31047347,31047931-31048023,
           31048102-31048210,31048619-31048755,31048851-31048928,
           31049015-31049104,31049402-31049467,31049546-31049638,
           31049711-31049839,31050024-31050122,31051366-31051512,
           31051605-31051910
          Length = 2050

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -3

Query: 131 NN*SKEK-YFSNHNIHLVITIEYLKEKYKNLRELRRLQIESSA 6
           N  ++EK     HN+ L    E LKEK KNL ELR+  ++  A
Sbjct: 180 NRITQEKDLLEKHNLWLD---EELKEKVKNLAELRKSNMDEEA 219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,891,044
Number of Sequences: 37544
Number of extensions: 246679
Number of successful extensions: 602
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)