Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_K02
         (884 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    27   0.26 
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    25   1.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.7  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.7  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.6 bits (56), Expect = 0.26
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 14  GSKYEVGYDRYDNVLY 61
           GS +E+G++ Y N+LY
Sbjct: 321 GSNFEIGFENYYNILY 336


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 20/68 (29%), Positives = 31/68 (45%)
 Frame = -3

Query: 777 FTNTALRVLYSVALVTAMRALARSSG*VALCDVTPARDPAIRCLIGCCCAVCGVSTASAR 598
           F  TALR L+++        LA  S     CD+    D  +RC++   CA  G  +A+  
Sbjct: 291 FEITALR-LFTIDNKLLFGVLAYYS---TTCDIATILDFWVRCVLSLHCAAVG-GSANIM 345

Query: 597 FHCSCAVN 574
             CS + +
Sbjct: 346 SGCSTSTS 353


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 633 CAVCGVSTASARFHCSCAVNCM 568
           CA   V  +   +H SCA N M
Sbjct: 572 CAAYYVCRSGLSYHLSCAENMM 593


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 502 AASTLHQEPHRR 467
           A   L QEPHRR
Sbjct: 259 ACGVLQQEPHRR 270


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 502 AASTLHQEPHRR 467
           A   L QEPHRR
Sbjct: 259 ACGVLQQEPHRR 270


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,060
Number of Sequences: 336
Number of extensions: 3234
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)