Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J24
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   1.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   1.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.6  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 364 FEFFSKQLQFMFQLYQTIF*MFPIRRF 284
           FE+F +++  M QLY   F +  I  F
Sbjct: 206 FEYFQRKILLMIQLYYLYFDVIVISTF 232


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -1

Query: 364 FEFFSKQLQFMFQLYQTIF*MFPIRRF 284
           FE+F +++  M QLY   F +  I  F
Sbjct: 132 FEYFQRKILLMIQLYYLYFDVIVISTF 158


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 332 VSALPNHFLNVPNSTF*SLYRSLLFYVFPKIAIV 231
           +S   N  L+  N+T+  LYR ++ Y   K++ V
Sbjct: 146 ISFFLNFMLHCNNTTWRCLYRWIVLYTLSKMSQV 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,341
Number of Sequences: 336
Number of extensions: 2968
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)