Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J24
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF151823-1|AAD34060.1|  327|Homo sapiens CGI-65 protein protein.       85   3e-16
BC000780-1|AAH00780.1|  327|Homo sapiens NADH dehydrogenase (ubi...    83   1e-15

>AF151823-1|AAD34060.1|  327|Homo sapiens CGI-65 protein protein.
          Length = 327

 Score = 85.0 bits (201), Expect = 3e-16
 Identities = 41/105 (39%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 416 LLWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGR-ALFHGYLDTRVPKDGRIKKAG 592
           ++W F     L+K+  T D   G G S   L+M    + AL +G L +  P+DG   ++G
Sbjct: 123 VVWQFRGKEDLDKWTVTSDKTIG-GRSEVFLKMGKNNQSALLYGTLSSEAPQDGESSRSG 181

Query: 593 YCAMRSKMQRKSFKRASTFDWHLYNTLVXKVRGDGRAYLLNISTE 727
           YCAM S++ R +FKR  ++DW  +NTL  +VRGDGR +++NI  +
Sbjct: 182 YCAMISRIPRGAFKRKMSYDWSQFNTLYLRVRGDGRPWMVNIKED 226


>BC000780-1|AAH00780.1|  327|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, assembly factor 1
           protein.
          Length = 327

 Score = 83.0 bits (196), Expect = 1e-15
 Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
 Frame = +2

Query: 416 LLWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGR-ALFHGYLDTRVPKDGRIKKAG 592
           ++W F     L+K+  T D   G G S   L+M    + AL +G L +  P+DG   ++G
Sbjct: 123 VVWQFRGKEDLDKWTVTSDKTIG-GRSEVFLKMGKNNQSALLYGTLSSEAPQDGESTRSG 181

Query: 593 YCAMRSKMQRKSFKRASTFDWHLYNTLVXKVRGDGRAYLLNISTE 727
           YCAM S++ R +F+R  ++DW  +NTL  +VRGDGR +++NI  +
Sbjct: 182 YCAMISRIPRGAFERKMSYDWSQFNTLYLRVRGDGRPWMVNIKED 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,822,083
Number of Sequences: 237096
Number of extensions: 1675104
Number of successful extensions: 7071
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7070
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)