Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J24
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094636-1|AAM10989.1|  296|Drosophila melanogaster AT05708p pro...   167   2e-41
AY060912-1|AAL28460.1|  296|Drosophila melanogaster GM05702p pro...   167   2e-41
AE014297-4425|AAF56928.1|  296|Drosophila melanogaster CG7598-PA...   167   2e-41

>AY094636-1|AAM10989.1|  296|Drosophila melanogaster AT05708p
           protein.
          Length = 296

 Score =  167 bits (405), Expect = 2e-41
 Identities = 77/167 (46%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 242 FWERHRKGGYDTTI-KTSNWEHLKNGLVXXXXXXXXXXXXXXXXYDMDPLLIARPGEIDL 418
           FWER +K GY T + + S  + + +GL                 ++ DP+L+ RPGE D+
Sbjct: 31  FWEREKKSGYKTKLPEPSKKQMIMDGLKDLKEEMKLWRQEVKEQFESDPILVFRPGETDV 90

Query: 419 LWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAGYC 598
           ++ F +P VL+K+  T D+DHGEG S+  LE+S AG  LFHG +++   KDG IK+ GY 
Sbjct: 91  VFDFKAPDVLDKWTVTTDADHGEGKSTATLELSAAGAGLFHGQVNSDHTKDGIIKRTGYA 150

Query: 599 AMRSKMQRKSFKRASTFDWHLYNTLVXKVRGDGRAYLLNISTEGYXD 739
            +R+K  RKSFKR +T+DW  YN L+ KVRGDGR+YL+N+ TEGY D
Sbjct: 151 NIRTKRVRKSFKRETTYDWTQYNMLIMKVRGDGRSYLINLHTEGYFD 197


>AY060912-1|AAL28460.1|  296|Drosophila melanogaster GM05702p
           protein.
          Length = 296

 Score =  167 bits (405), Expect = 2e-41
 Identities = 78/167 (46%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 242 FWERHRKGGYDTTI-KTSNWEHLKNGLVXXXXXXXXXXXXXXXXYDMDPLLIARPGEIDL 418
           FWER +K GY T + + S  + + +GL                 ++ DP+L+ RPGE D+
Sbjct: 31  FWEREKKSGYKTKLPEPSKKQMIMDGLRDLKEEMKLWRQEVKEQFESDPILVFRPGETDV 90

Query: 419 LWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAGYC 598
           ++ F +P VL+K+  T D+DHGEG S+  LE+S AG  LFHG +++   KDG IK+ GY 
Sbjct: 91  VFDFKAPDVLDKWTVTTDADHGEGKSTATLELSAAGAGLFHGQVNSDHTKDGIIKRTGYA 150

Query: 599 AMRSKMQRKSFKRASTFDWHLYNTLVXKVRGDGRAYLLNISTEGYXD 739
            +R+K  RKSFKR +T+DW  YN LV KVRGDGR+YL+N+ TEGY D
Sbjct: 151 NIRTKRVRKSFKRETTYDWTQYNMLVMKVRGDGRSYLINLHTEGYFD 197


>AE014297-4425|AAF56928.1|  296|Drosophila melanogaster CG7598-PA
           protein.
          Length = 296

 Score =  167 bits (405), Expect = 2e-41
 Identities = 78/167 (46%), Positives = 108/167 (64%), Gaps = 1/167 (0%)
 Frame = +2

Query: 242 FWERHRKGGYDTTI-KTSNWEHLKNGLVXXXXXXXXXXXXXXXXYDMDPLLIARPGEIDL 418
           FWER +K GY T + + S  + + +GL                 ++ DP+L+ RPGE D+
Sbjct: 31  FWEREKKSGYKTKLPEPSKKQMIMDGLRDLKEEMKLWRQEVKEQFESDPILVFRPGETDV 90

Query: 419 LWCFNSPTVLEKFVTTCDSDHGEGYSSCALEMSPAGRALFHGYLDTRVPKDGRIKKAGYC 598
           ++ F +P VL+K+  T D+DHGEG S+  LE+S AG  LFHG +++   KDG IK+ GY 
Sbjct: 91  VFDFKAPDVLDKWTVTTDADHGEGKSTATLELSAAGAGLFHGQVNSDHTKDGIIKRTGYA 150

Query: 599 AMRSKMQRKSFKRASTFDWHLYNTLVXKVRGDGRAYLLNISTEGYXD 739
            +R+K  RKSFKR +T+DW  YN LV KVRGDGR+YL+N+ TEGY D
Sbjct: 151 NIRTKRVRKSFKRETTYDWTQYNMLVMKVRGDGRSYLINLHTEGYFD 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,485,373
Number of Sequences: 53049
Number of extensions: 511960
Number of successful extensions: 1016
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)