Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J22
(715 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 38 4e-04
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 36 0.002
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 35 0.003
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 33 0.009
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 30 0.063
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 27 0.77
AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein. 26 1.4
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 25 1.8
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 25 1.8
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 25 3.1
AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative acetyltr... 25 3.1
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 25 3.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 7.2
AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein ... 23 9.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 23 9.5
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 37.5 bits (83), Expect = 4e-04
Identities = 30/164 (18%), Positives = 73/164 (44%)
Frame = +2
Query: 122 LEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLE 301
L+K R + AK +L+A+ A+ + + ++++++ E +L ++++ + +
Sbjct: 753 LQKTIVEARETQTQCSAKVKDLQAKIADGKGHR-ERELKSAEEDLKRSKKKSEESRKNWK 811
Query: 302 EKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLEN 481
+ E+ + + E+ L + I A +L E S DE A L+
Sbjct: 812 KHEQDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQ 871
Query: 482 RSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEADL 613
+ +E+M++ +LK ++ K+ DE+ ++ E ++
Sbjct: 872 QIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEI 915
Score = 23.8 bits (49), Expect = 5.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +2
Query: 161 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQV 286
E+Q K+ R + E++ +KKIQ I +LD+ ++ ++V
Sbjct: 993 EEQYKEVMRRKKVVEDD----KKKIQAIITDLDEEKKKKLKV 1030
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 35.5 bits (78), Expect = 0.002
Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +2
Query: 161 EQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAES 334
E + ++ LR E +LQK I+ + +LDQ + ++ Q + K+ A+ E+
Sbjct: 776 EGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAKKDAMGAVEA 835
Query: 335 EVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEERMDA 514
E+A + I L ++++ +E +R R L + ++ R +A
Sbjct: 836 EIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESMEERKRTRVALS--AALEQARQEA 893
Query: 515 LE 520
E
Sbjct: 894 SE 895
Score = 27.1 bits (57), Expect = 0.58
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +2
Query: 113 AXKLEKD-NALDRAAMCEQQAKDANLRAEKAEEEAR--QLQKKIQTIENELDQTQESLMQ 283
A ++E+D +R + + + + + EKA+ + R +L I + + E+D ++
Sbjct: 419 ARQIEQDLQERNRDGLSQVEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAH 478
Query: 284 VNGKLEEKEKALQNAESEVAALNRRIQ 364
V EEK +SE + ++++
Sbjct: 479 VKDAREEKHHERCAKQSETTRIEKQLE 505
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 34.7 bits (76), Expect = 0.003
Identities = 35/161 (21%), Positives = 63/161 (39%)
Frame = +2
Query: 125 EKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEE 304
E D ++ E K+ R + E+ R LQ+++ ++ QT+ + + K +E
Sbjct: 627 ECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQL----SKYQQTKMKVKRQEQKCKE 682
Query: 305 KEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENR 484
L N + E R + A + + AS+ D E+ ++ E R
Sbjct: 683 LTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALERYAAASREHDLLEQRIRLFEER 742
Query: 485 SLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMVEA 607
+ E LE+ + A+ K V +KLA V+A
Sbjct: 743 NNDREANFRLLEDAYQSAK-------KTLANVEKKLAEVKA 776
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 33.1 bits (72), Expect = 0.009
Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 9/136 (6%)
Frame = +2
Query: 161 EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLM----QVNGKLEEKEKALQNA 328
E K+A +K EEA +L + I+ N T L Q+NG+L + + L+
Sbjct: 1434 EDARKNAQTAQDKYAEEASKLAENIKKRANATKNTARDLHHEADQLNGRLAKTDNRLEER 1493
Query: 329 ESEVA----ALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLAD 496
E+++ N + + + E S E R++ N SL D
Sbjct: 1494 EAQIRKDLNLTNEAKEKVGQAQLNSNEAKSQVDKAMREVSLIMSELANLREIDVN-SLDD 1552
Query: 497 -EERMDALENQLKEAR 541
E R+ A E +L++A+
Sbjct: 1553 LERRLSAAEKELEDAQ 1568
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 30.3 bits (65), Expect = 0.063
Identities = 28/131 (21%), Positives = 51/131 (38%), Gaps = 7/131 (5%)
Frame = +2
Query: 164 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNA----- 328
Q++KD + E+E Q I+ +E Q +E ++ +LEE + A++ A
Sbjct: 931 QKSKD---KINSMEDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSS 987
Query: 329 --ESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERARKVLENRSLADEE 502
+ E+ AL +R T KL E + K L+ + +E
Sbjct: 988 SIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDTLPHWQLQLKPLKLHEIPEEP 1047
Query: 503 RMDALENQLKE 535
+ L+ +E
Sbjct: 1048 PQEPLKEYTEE 1058
Score = 29.9 bits (64), Expect = 0.083
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 209 EARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKALQNAESEVAALN 352
E ++K+Q NE + ++L V GKL+E A+Q+ S+ L+
Sbjct: 542 ELETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 24.2 bits (50), Expect = 4.1
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +2
Query: 422 LSEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKYDEVARKLAMV 601
L E + E E R +E DAL+ + E L +E K+YDE+
Sbjct: 315 LCEQKRKIGEFEVERDQAAGILAKHDETYDALKAERVEKEKLVKEEIKQYDELVSAKESK 374
Query: 602 EADL 613
E+ L
Sbjct: 375 ESTL 378
Score = 24.2 bits (50), Expect = 4.1
Identities = 20/101 (19%), Positives = 39/101 (38%)
Frame = +2
Query: 245 ENELDQTQESLMQVNGKLEEKEKALQNAESEVAALNRRIQXXXXXXXXXXXXXATATAKL 424
E+EL Q + KLE + + E ++ R+Q TA KL
Sbjct: 491 ESELKICQHDEVTERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKL 550
Query: 425 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFL 547
E + E + + ++ + +E M A+++ + + L
Sbjct: 551 QENANEERELTQTLRAVQGKL---QESMAAMQSTRSQGKVL 588
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 26.6 bits (56), Expect = 0.77
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Frame = +2
Query: 449 ESERARKVLENRSLADEERMDALE-------NQLKEARFLAEEADKKYDEV 580
+ E + E + ADEE D E ++L+EAR +AEE +++ E+
Sbjct: 76 DEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEERQQEL 126
>AY846632-1|AAW31598.1| 412|Anopheles gambiae SAGLIN protein.
Length = 412
Score = 25.8 bits (54), Expect = 1.4
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +2
Query: 149 AAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQVNGKLEEKEKAL 319
AA E+Q A ++ +E + LQK++ + + + L+ N + E ++AL
Sbjct: 116 AATLEEQLHAAQQETQQEQEMKKALQKQLDALTDSRNALYIDLLLANIAIGETKQAL 172
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
phosphoprotein protein.
Length = 1200
Score = 25.4 bits (53), Expect = 1.8
Identities = 25/72 (34%), Positives = 30/72 (41%)
Frame = +1
Query: 202 RRRGETASEEDPDN*KRARPDTGVSHAG*RKARREGEGSAER*VRSGCPEPTYPTAGGGP 381
R+R + EED D +R S +G R R G GS R+G AG G
Sbjct: 1047 RKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGS-----RAG------SRAGSGS 1095
Query: 382 REVRGASRDRHR 417
R R SR R R
Sbjct: 1096 RS-RSRSRSRSR 1106
Score = 24.2 bits (50), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 164 QQAKDANLRAEKAEEEARQLQKKIQTIENE 253
QQA+ RA K +EE R L++K Q +E E
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQK-QELERE 849
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 704 EISGCYQRHGAPPQAQRFWIRRTRHA 627
E + C+QR+ A P+A R IRR A
Sbjct: 849 EDARCHQRYLADPEASRAVIRREERA 874
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 20 HHSTRRLDIFSSKGAEKTKPPKWTR 94
HH ++L I SK A PP+ +R
Sbjct: 816 HHDPQKLRIVVSKSANAMHPPRGSR 840
>AJ439060-14|CAD27765.1| 471|Anopheles gambiae putative
acetyltransferase protein.
Length = 471
Score = 24.6 bits (51), Expect = 3.1
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 494 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRT 387
PP S PY+ IHR P R + + PR+
Sbjct: 230 PPPPTSNEPYLVVPIHRHPELKEQCVRLINTEWPRS 265
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 24.6 bits (51), Expect = 3.1
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -3
Query: 557 PPQRGTWLPSADSRGRP--CAP--HPPTTCSRAP 468
PP R W P GRP P H PTT + AP
Sbjct: 90 PPFRPPWHPRPPFGGRPWWLRPPFHRPTTSTAAP 123
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 23.4 bits (48), Expect = 7.2
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = +2
Query: 425 SEASQAADESERARKVLENRSLADEERMDALENQLKEARFLAEEADKKY 571
SE+S ++DES+ ++ S + EER E+ ++ ++ +E KY
Sbjct: 1926 SESSSSSDESD------DSNSSSSEERKPNREHFFEKQQYTEKECPVKY 1968
>AY263176-1|AAP78791.1| 705|Anopheles gambiae TmcB-like protein
protein.
Length = 705
Score = 23.0 bits (47), Expect = 9.5
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 184 VGVFGLLLTHGSAVERI 134
V +FG+LLTHG + ++
Sbjct: 527 VSLFGVLLTHGYLIMQV 543
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 23.0 bits (47), Expect = 9.5
Identities = 28/127 (22%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Frame = -3
Query: 668 PQAQRFWIRRTRHAPRRAPSQPQPWPAYEQPHRISCRPPQRGTWLPSADSRGRPCA--PH 495
P A ++R + A PQP A P + PP R + P+ P A
Sbjct: 65 PSAVSSQLQRPQPTVLAASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPRAEVKF 124
Query: 494 PPTTCSRAPYVRARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVG--SGQPLRTQRS 321
P+ + P VR + ++ P + S PPP + P R
Sbjct: 125 VPSVPLKTPPVRPLLPQQQQHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPG 184
Query: 320 AEPSPSL 300
P P +
Sbjct: 185 MPPGPQM 191
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,062
Number of Sequences: 2352
Number of extensions: 10494
Number of successful extensions: 46
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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