Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J19
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    22   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   3.1  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   5.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
 Frame = -2

Query: 356 VCKKYFFFK**HLNCFYY-YCCFFVGTHSCGILIMSLH 246
           +C  YF      L C YY YC F + T     L+   H
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYH 168



 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 356 VCKKYFFFK**HLNCFYYYCCFFV 285
           +C  YF+     L C YY+C  F+
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFI 306



 Score = 21.4 bits (43), Expect = 4.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 356 VCKKYFFFK**HLNCFYYYCCFFV 285
           +C  YF++    L C YY+   F+
Sbjct: 98  LCTYYFYYAFIILLCVYYFYYAFI 121



 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -2

Query: 356 VCKKYFFFK**HLNCFYYYCCFFV 285
           +C  YF      L C YY+   F+
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFI 220


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 320 LNCFYYYCCFFVGTHSCGILIMSLHTA 240
           +N    Y C+  G  SC ++I S+  A
Sbjct: 137 INISATYICYAFGKFSCKVMIQSVSFA 163


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 320 LNCFYYYCCFFVGTHSCGILIMSLHTA 240
           +N    Y C+  G  SC ++I S+  A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 320 LNCFYYYCCFFVGTHSCGILIMSLHTA 240
           +N    Y C+  G  SC ++I S+  A
Sbjct: 370 INISATYICYAFGKFSCKVMIQSVSFA 396


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 228 LKTTMFQYQGSDSYNCTHYSKRYYAI 151
           LKT M  + G   Y C H  +++  +
Sbjct: 25  LKTHMRLHTGERPYRCEHCDRQFVQV 50


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = -1

Query: 228 LKTTMFQYQGSDSYNCTHYSKRYYAI 151
           LKT M  + G   Y C H  +++  +
Sbjct: 178 LKTHMRLHTGERPYRCEHCDRQFVQV 203


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 72  SQNVQIALWRKSRSDGRKTSS 134
           +  V +ALW + R  GRK  S
Sbjct: 53  NSTVLLALWTRRRYAGRKKLS 73


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/11 (54%), Positives = 6/11 (54%)
 Frame = -1

Query: 288  CRNSFLWNIDH 256
            C N   WN DH
Sbjct: 2265 CPNGLFWNKDH 2275


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 356 VCKKYFFFK**HLNCFYYYCCFFV 285
           VC   + +   H+  F+  CC F+
Sbjct: 62  VCFNSYMYAFTHIFFFFAICCDFI 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,179
Number of Sequences: 336
Number of extensions: 1338
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)