Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J19
         (450 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0249 - 27150928-27151146                                         27   7.0  
11_04_0195 - 14725553-14725571,14725988-14726079,14727214-147273...    27   9.2  

>02_05_0249 - 27150928-27151146
          Length = 72

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -2

Query: 185 IAHIIPNVITLLIVFSRA*RFSSIGSTLSPKGN 87
           +AH+ P ++  + VF R    +S G +LS  GN
Sbjct: 1   MAHLTPGLVWAVNVFPRRHHLASTGCSLSGSGN 33


>11_04_0195 -
           14725553-14725571,14725988-14726079,14727214-14727335,
           14727588-14727597,14727798-14727896,14728046-14728612
          Length = 302

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
 Frame = -1

Query: 222 TTMFQYQGSDSYNCTHYSKRYYAIDSVLACLT-----FFFHRIYSFSKGQSEHFAIN 67
           T  FQ +G   ++C  +     ++DSVLACL          ++ SF   Q E +++N
Sbjct: 227 TVNFQSRGLP-FSCKDHCDTIMSVDSVLACLASEALDLEKKQLQSFGMQQLERYSVN 282


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,424,961
Number of Sequences: 37544
Number of extensions: 120995
Number of successful extensions: 229
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)