Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J18
         (770 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8MXZ7 Cluster: Cuticle protein; n=1; Bombyx mori|Rep: ...    79   2e-13
UniRef50_P77947 Cluster: Malate synthase; n=9; Bacteria|Rep: Mal...    36   1.1  
UniRef50_Q6L4I9 Cluster: Putative uncharacterized protein OSJNBa...    36   1.5  
UniRef50_Q08WC5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.9  
UniRef50_Q75HR2 Cluster: Putative uncharacterized protein P0636F...    33   7.9  

>UniRef50_Q8MXZ7 Cluster: Cuticle protein; n=1; Bombyx mori|Rep:
           Cuticle protein - Bombyx mori (Silk moth)
          Length = 407

 Score = 78.6 bits (185), Expect = 2e-13
 Identities = 45/136 (33%), Positives = 45/136 (33%)
 Frame = +1

Query: 124 SFFHGLGYDSNYGSTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGYTSP 303
           SFFHGLGYDSNYGSTF                                       GYTSP
Sbjct: 29  SFFHGLGYDSNYGSTFGYGSGYQNLGGLGYSGYSSPSVYSSPSSYSYSTPAVSSYGYTSP 88

Query: 304 AVSYANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTP 483
           AVSYAN                                                    TP
Sbjct: 89  AVSYANAGYRYASPAYSYAAPAFSAASYAAPVYSAASYAAPAYSAASYAPAVSSYGYSTP 148

Query: 484 QVRYSSAPAVSYSSFT 531
           QVRYSSAPAVSYSSFT
Sbjct: 149 QVRYSSAPAVSYSSFT 164


>UniRef50_P77947 Cluster: Malate synthase; n=9; Bacteria|Rep: Malate
           synthase - Streptomyces arenae
          Length = 543

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = -2

Query: 133 GRSYACHVRPCLLSWRRRQWPRGHKIKTKDLISVDLTVGCRR 8
           G++YA  +RP L SWR   WPRG  +  + L+  D + G RR
Sbjct: 152 GKTYA--LRP-LKSWRPSSWPRGWHLNERHLVDPDGSFGARR 190


>UniRef50_Q6L4I9 Cluster: Putative uncharacterized protein
           OSJNBa0074P11.3; n=3; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0074P11.3 - Oryza sativa subsp. japonica (Rice)
          Length = 342

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGS 628
           G+ G+   GG  GR+ + RGSR    G +T +  G  G V    GS
Sbjct: 47  GKAGSAALGGLGGRIRRPRGSRRRAAGTATAYGGGSGGAVLGKAGS 92


>UniRef50_Q08WC5 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 1717

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 20/46 (43%), Positives = 22/46 (47%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGS 628
           G  G   HG   G +AQ  G  VA G G  V   G   GVAQ RG+
Sbjct: 519 GPLGLAGHGRQQGPLAQGVGQVVAVGAGELVGMPGHLLGVAQQRGT 564


>UniRef50_Q75HR2 Cluster: Putative uncharacterized protein
           P0636F09.5; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0636F09.5 - Oryza sativa subsp. japonica (Rice)
          Length = 340

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGG 682
           GR G      SDGR A  RGSRVA GGG
Sbjct: 87  GRRGRPRGRSSDGRAAGPRGSRVAAGGG 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 284,042,146
Number of Sequences: 1657284
Number of extensions: 2602132
Number of successful extensions: 11324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11230
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)