Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J18
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52846-1|CAA37037.1|  575|Drosophila melanogaster protein ( Dros...    30   3.1  
BT015209-1|AAT94438.1|  575|Drosophila melanogaster RE56857p pro...    29   5.3  
BT011476-1|AAR99134.1|  719|Drosophila melanogaster RE11923p pro...    29   5.3  
BT001716-1|AAN71471.1|  578|Drosophila melanogaster RE68337p pro...    29   5.3  
AE014297-394|AAG22212.1|  578|Drosophila melanogaster CG10279-PF...    29   5.3  
AE014297-393|AAN14332.1|  578|Drosophila melanogaster CG10279-PC...    29   5.3  
AE014297-392|AAF51926.2|  578|Drosophila melanogaster CG10279-PB...    29   5.3  
AE014297-391|AAF51927.2|  578|Drosophila melanogaster CG10279-PE...    29   5.3  
AE014297-390|AAN14331.1|  575|Drosophila melanogaster CG10279-PD...    29   5.3  
AE014297-389|AAG22213.2|  719|Drosophila melanogaster CG10279-PA...    29   5.3  
L00632-1|AAA28415.1|  444|Drosophila melanogaster protein ( Dros...    29   7.1  
BT009992-1|AAQ22461.1|  449|Drosophila melanogaster RE37385p pro...    29   7.1  
AE013599-3852|AAF47194.1|  449|Drosophila melanogaster CG4354-PA...    29   7.1  

>X52846-1|CAA37037.1|  575|Drosophila melanogaster protein (
           Drosophila melanogasterRM62 mRNA for novel RNA helicase.
           ).
          Length = 575

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 15  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGAVEKRRDDR 59


>BT015209-1|AAT94438.1|  575|Drosophila melanogaster RE56857p
           protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 15  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 59


>BT011476-1|AAR99134.1|  719|Drosophila melanogaster RE11923p
           protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 159 GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 203


>BT001716-1|AAN71471.1|  578|Drosophila melanogaster RE68337p
           protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 18  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62


>AE014297-394|AAG22212.1|  578|Drosophila melanogaster CG10279-PF,
           isoform F protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 18  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62


>AE014297-393|AAN14332.1|  578|Drosophila melanogaster CG10279-PC,
           isoform C protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 18  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62


>AE014297-392|AAF51926.2|  578|Drosophila melanogaster CG10279-PB,
           isoform B protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 18  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62


>AE014297-391|AAF51927.2|  578|Drosophila melanogaster CG10279-PE,
           isoform E protein.
          Length = 578

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 18  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 62


>AE014297-390|AAN14331.1|  575|Drosophila melanogaster CG10279-PD,
           isoform D protein.
          Length = 575

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 15  GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 59


>AE014297-389|AAG22213.2|  719|Drosophila melanogaster CG10279-PA,
           isoform A protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           GR G    GG D R     G+R   GGG   +H   NG V + R  R
Sbjct: 159 GRGGD--RGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDR 203


>L00632-1|AAA28415.1|  444|Drosophila melanogaster protein (
           Drosophila melanogasterC/EBP gene, complete cds. ).
          Length = 444

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           G    +++G   G    + G    +GG +T   +G NG    S GS+
Sbjct: 251 GNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNGSQ 297


>BT009992-1|AAQ22461.1|  449|Drosophila melanogaster RE37385p
           protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           G    +++G   G    + G    +GG +T   +G NG    S GS+
Sbjct: 256 GNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNGSQ 302


>AE013599-3852|AAF47194.1|  449|Drosophila melanogaster CG4354-PA
           protein.
          Length = 449

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/47 (27%), Positives = 21/47 (44%)
 Frame = -3

Query: 765 GRXGAVFHGGSDGRVAQSRGSRVAHGGGSTVFHSGCNGGVAQSRGSR 625
           G    +++G   G    + G    +GG +T   +G NG    S GS+
Sbjct: 256 GNGAGLYNGYGSGANGLTGGGNPLNGGNTTPSSNGSNGSTGSSNGSQ 302


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,150,153
Number of Sequences: 53049
Number of extensions: 141339
Number of successful extensions: 884
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)