Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J17
(772 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7L483 Cluster: Selenoprotein W2; n=1; Artemia francisc... 88 3e-16
UniRef50_Q7QFL8 Cluster: ENSANGP00000007373; n=4; Diptera|Rep: E... 84 4e-15
UniRef50_Q9VRA0 Cluster: CG15456-PA; n=1; Drosophila melanogaste... 72 2e-11
UniRef50_UPI0000D5581C Cluster: PREDICTED: similar to CG15456-PA... 71 3e-11
UniRef50_UPI00015B5FCB Cluster: PREDICTED: similar to selenoprot... 66 9e-10
UniRef50_Q802F5 Cluster: Selenoprotein W2a; n=6; Euteleostomi|Re... 57 6e-07
UniRef50_Q802G8 Cluster: Selenoprotein W2b; n=5; Danio rerio|Rep... 56 7e-07
UniRef50_Q9BRT3 Cluster: Uncharacterized protein C17orf37; n=13;... 50 8e-05
UniRef50_A7RUC6 Cluster: Predicted protein; n=1; Nematostella ve... 48 3e-04
UniRef50_A6TUD2 Cluster: Conserved hypothetical selenoprotein; n... 47 6e-04
UniRef50_Q4T504 Cluster: Chromosome undetermined SCAF9476, whole... 46 0.001
UniRef50_P63302 Cluster: Selenoprotein W; n=23; Euteleostomi|Rep... 45 0.002
UniRef50_UPI00005842AA Cluster: PREDICTED: similar to selenoprot... 42 0.017
UniRef50_Q5YEV1 Cluster: Selenoprotein W 1; n=1; Bigelowiella na... 41 0.039
UniRef50_Q5FWB9 Cluster: CDNA sequence BC089491; n=4; Murinae|Re... 40 0.052
UniRef50_Q8H6T4 Cluster: Selenoprotein SelW1; n=1; Chlamydomonas... 40 0.052
UniRef50_Q4JBM6 Cluster: Putative uncharacterized protein; n=2; ... 40 0.068
UniRef50_Q1CXH4 Cluster: Putative uncharacterized protein; n=2; ... 39 0.16
UniRef50_P59797 Cluster: Selenoprotein V; n=6; Eutheria|Rep: Sel... 37 0.48
UniRef50_A6CJI6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.64
UniRef50_UPI00006CF806 Cluster: selT/selW/selH selenoprotein dom... 36 0.84
UniRef50_A6G4H0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.84
UniRef50_Q7QSG1 Cluster: GLP_64_35175_29128; n=2; cellular organ... 34 4.5
UniRef50_A4BRV4 Cluster: SelT/selW/selH selenoprotein; n=8; Bact... 33 5.9
UniRef50_Q7QZL6 Cluster: GLP_159_2124_2369; n=1; Giardia lamblia... 33 7.9
>UniRef50_A7L483 Cluster: Selenoprotein W2; n=1; Artemia
franciscana|Rep: Selenoprotein W2 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 94
Score = 87.8 bits (208), Expect = 3e-16
Identities = 45/94 (47%), Positives = 57/94 (60%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
K+HVEYCGAC Y LA IR P A V GR+ SFEV VN +LI+SKL T
Sbjct: 3 KIHVEYCGACGYAPRYQELAAKIRKAAPDAEVSGNVGRRSSFEVTVNGELIHSKLSTNGF 62
Query: 339 PDYGEVAQVVHDVSKGQEPRXNQRRTTNQLCYIL 440
PD+ EV ++V V+KG +PR ++ T+ C IL
Sbjct: 63 PDFDEVVEIVISVTKGDKPRTVEK--THSSCIIL 94
>UniRef50_Q7QFL8 Cluster: ENSANGP00000007373; n=4; Diptera|Rep:
ENSANGP00000007373 - Anopheles gambiae str. PEST
Length = 104
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/77 (48%), Positives = 50/77 (64%)
Frame = +3
Query: 156 PKVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMA 335
P+V +EYC C+ CL LA +IR P A V+C+ GR+GSFEV +ND L++SKL ++A
Sbjct: 11 PRVDIEYCNVCNSKPQCLELAALIREQIPEAEVVCRTGRRGSFEVQINDTLVHSKLGSLA 70
Query: 336 LPDYGEVAQVVHDVSKG 386
P Y EV Q V + G
Sbjct: 71 FPRYEEVVQNVRNARDG 87
>UniRef50_Q9VRA0 Cluster: CG15456-PA; n=1; Drosophila
melanogaster|Rep: CG15456-PA - Drosophila melanogaster
(Fruit fly)
Length = 95
Score = 71.7 bits (168), Expect = 2e-11
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
KV VEYCG C++ G C L + + +P + C+ GR+GSFEV ++ +L++SKL +A
Sbjct: 3 KVEVEYCGICNFSGQCHLLREFLLASSPDLDISCRTGRRGSFEVSIDGQLVHSKLSCLAF 62
Query: 339 PDYGEVAQVVHDVSKGQ 389
P + V V +G+
Sbjct: 63 PQHASVLAQVQKAERGE 79
>UniRef50_UPI0000D5581C Cluster: PREDICTED: similar to CG15456-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG15456-PA - Tribolium castaneum
Length = 96
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
+V VE+CG C Y LAQ I+ P + GR+ +FEV VN L++SKL T+A
Sbjct: 4 EVDVEFCGTCGYFKKFEELAQHIKAKHPDIELNGHEGRRATFEVKVNGTLVHSKLTTLAY 63
Query: 339 PDYGEVAQVVHDVSKGQEPR 398
PDY +++ ++ +V++G+EPR
Sbjct: 64 PDYDDLSAIIDEVAQGKEPR 83
>UniRef50_UPI00015B5FCB Cluster: PREDICTED: similar to selenoprotein
W2; n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
selenoprotein W2 - Nasonia vitripennis
Length = 75
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/59 (52%), Positives = 44/59 (74%)
Frame = +3
Query: 213 LAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQ 389
+AQ I+ P A + + GRQ SFEV VND+L++SKL+TMA PD+ EV ++V DVS+G+
Sbjct: 1 MAQKIKEALPEAKISGEPGRQASFEVRVNDELVHSKLQTMAFPDFKEVTELVKDVSQGK 59
>UniRef50_Q802F5 Cluster: Selenoprotein W2a; n=6; Euteleostomi|Rep:
Selenoprotein W2a - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 95
Score = 56.8 bits (131), Expect = 6e-07
Identities = 28/77 (36%), Positives = 42/77 (54%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
++ VEYCG C Y L +++ + A V GRQGSFE+ +N +LI+SKL+T
Sbjct: 4 QIKVEYCGGCGYEPRYQELKRVVTAEFTDADVSGFVGRQGSFEIEINGQLIFSKLETSGF 63
Query: 339 PDYGEVAQVVHDVSKGQ 389
P ++ V+ GQ
Sbjct: 64 PYEDDIMGVIQRAYDGQ 80
>UniRef50_Q802G8 Cluster: Selenoprotein W2b; n=5; Danio rerio|Rep:
Selenoprotein W2b - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 94
Score = 56.4 bits (130), Expect = 7e-07
Identities = 33/96 (34%), Positives = 51/96 (53%)
Frame = +3
Query: 153 IPKVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTM 332
+ KV +EYCGAC Y L + I + P A V GR+G FE+ +ND L++SKL++
Sbjct: 2 VVKVKIEYCGACGYEPRFQELKREICGNCPDAEVSGFVGRRGCFEIQINDFLVFSKLESG 61
Query: 333 ALPDYGEVAQVVHDVSKGQEPRXNQRRTTNQLCYIL 440
P Y E ++ V K ++ + + + C IL
Sbjct: 62 GFP-YSE--DIIEAVVKAKDGKPEKIIRNRKECIIL 94
>UniRef50_Q9BRT3 Cluster: Uncharacterized protein C17orf37; n=13;
Amniota|Rep: Uncharacterized protein C17orf37 - Homo
sapiens (Human)
Length = 115
Score = 49.6 bits (113), Expect = 8e-05
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
++ VEYC C + L LA ++ P + + G G+FE+ +N +L++SKL+
Sbjct: 24 RIVVEYCEPCGFEATYLELASAVKEQYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGF 83
Query: 339 PDYGEVAQVVHDVSKGQ 389
P ++ + + S G+
Sbjct: 84 PYEKDLIEAIRRASNGE 100
>UniRef50_A7RUC6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 112
Score = 47.6 bits (108), Expect = 3e-04
Identities = 27/63 (42%), Positives = 33/63 (52%)
Frame = +3
Query: 207 LALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKG 386
L L I + P A V K GR GSFEV +N K ++SKLK P EV V + KG
Sbjct: 36 LGLRDEILAECPEAQVEGKVGRSGSFEVTINGKEVFSKLKQGGFPVCDEVVNSVIEACKG 95
Query: 387 QEP 395
+P
Sbjct: 96 LDP 98
>UniRef50_A6TUD2 Cluster: Conserved hypothetical selenoprotein; n=2;
Alkaliphilus metalliredigens QYMF|Rep: Conserved
hypothetical selenoprotein - Alkaliphilus
metalliredigens QYMF
Length = 74
Score = 46.8 bits (106), Expect = 6e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQII----RNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLK 326
K+ +EYC C Y L LA+ + +ND PS +L G G FEV V ++LI+SK +
Sbjct: 3 KLSIEYCTGCGYLPKALGLAEELLSKYKNDLPSLTLLPSSG--GVFEVKVGEQLIFSKKE 60
Query: 327 TMALPDYGEV 356
P++ E+
Sbjct: 61 VGRFPEFNEI 70
>UniRef50_Q4T504 Cluster: Chromosome undetermined SCAF9476, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF9476,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 89
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +3
Query: 192 YGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVH 371
YG LA++++ + A V GR GSFE+V+N++L++SKL+T P +V QV+
Sbjct: 9 YGPRYEELARVVKAEFLDADVSGFVGRLGSFEIVINEQLVFSKLETGGFPYEDDVLQVIQ 68
Query: 372 DVSKGQ 389
G+
Sbjct: 69 CAYDGK 74
>UniRef50_P63302 Cluster: Selenoprotein W; n=23; Euteleostomi|Rep:
Selenoprotein W - Homo sapiens (Human)
Length = 87
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +3
Query: 162 VHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRG---RQGSFEVVVNDKLIYSKLK 326
V V YCGAC Y L L + + ++ P L +C G G FEV+V KLI+SK K
Sbjct: 5 VRVVYCGACGYKSKYLQLKKKLEDEFPGRLDICGEGTPQATGFFEVMVAGKLIHSKKK 62
>UniRef50_UPI00005842AA Cluster: PREDICTED: similar to selenoprotein
W2a; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to selenoprotein W2a - Strongylocentrotus
purpuratus
Length = 71
Score = 41.9 bits (94), Expect = 0.017
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 261 KRGRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDVSKGQ 389
KRGR SFEV +N +++YSKLK PD + + + D KG+
Sbjct: 14 KRGRPSSFEVKLNGQVLYSKLKNGGFPDLDAIVEAIEDY-KGE 55
>UniRef50_Q5YEV1 Cluster: Selenoprotein W 1; n=1; Bigelowiella
natans|Rep: Selenoprotein W 1 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 90
Score = 40.7 bits (91), Expect = 0.039
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRN--DTPSALVL--CKRGRQGSFEVVVNDKLIYSKLK 326
KVHV YCG C Y G AQ++ D S + G FE+ VN K+++SK+
Sbjct: 5 KVHVVYCGGCGYFGAVKQFAQLLAKVVDQKSYKLTHEATPTESGKFEISVNGKVVHSKIG 64
Query: 327 TMALPDYGEVAQVV 368
D E VV
Sbjct: 65 GKGFVDSQEKFDVV 78
>UniRef50_Q5FWB9 Cluster: CDNA sequence BC089491; n=4; Murinae|Rep:
CDNA sequence BC089491 - Mus musculus (Mouse)
Length = 328
Score = 40.3 bits (90), Expect = 0.052
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 162 VHVEYCGACDYGGHCLALAQIIRNDTPSALVL-CKRGRQ--GSFEVVVNDKLIYSKLKTM 332
+ V YCG C YG + L + + + P+ L +R Q G FEV V+ KLI+SK K
Sbjct: 247 IRVMYCGLCSYGLRYIILKRTLEHQFPNLLEFEEERATQVTGEFEVFVDGKLIHSKKKGD 306
Query: 333 ALPDYGEVAQVV 368
D + ++V
Sbjct: 307 GFVDESGLKKLV 318
>UniRef50_Q8H6T4 Cluster: Selenoprotein SelW1; n=1; Chlamydomonas
reinhardtii|Rep: Selenoprotein SelW1 - Chlamydomonas
reinhardtii
Length = 88
Score = 40.3 bits (90), Expect = 0.052
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVL----CKRGRQGSFEVVVNDKLIYSK 320
+VHV YCG C YG +L IR P+A + G FEV VN +L++SK
Sbjct: 5 QVHVLYCGGCGYGSRYRSLENAIRMKFPNADIKFSFEATPQATGFFEVEVNGELVHSK 62
>UniRef50_Q4JBM6 Cluster: Putative uncharacterized protein; n=2;
Sulfolobaceae|Rep: Putative uncharacterized protein -
Sulfolobus acidocaldarius
Length = 80
Score = 39.9 bits (89), Expect = 0.068
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +3
Query: 162 VHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMALP 341
V + YC C + L LA+ + + V ++G+ G F+V V+ +LI+S+ K P
Sbjct: 5 VKIVYCRPCGFLDRALNLARDLLSYYEGVNVELEQGKNGIFDVYVDGQLIFSRFKEKRFP 64
Query: 342 DYGEV 356
D E+
Sbjct: 65 DSQEI 69
>UniRef50_Q1CXH4 Cluster: Putative uncharacterized protein; n=2;
Myxococcus xanthus DK 1622|Rep: Putative uncharacterized
protein - Myxococcus xanthus (strain DK 1622)
Length = 103
Score = 38.7 bits (86), Expect = 0.16
Identities = 24/74 (32%), Positives = 35/74 (47%)
Frame = +3
Query: 156 PKVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMA 335
PKV + YC AC Y A ++++ L G GS+EV V+ K++ K ++A
Sbjct: 29 PKVTITYCTACGYRPRAARAAAALKDELDVEAELLP-GPSGSYEVAVDGKVVIRK-ASLA 86
Query: 336 LPDYGEVAQVVHDV 377
P EV V V
Sbjct: 87 FPTDHEVVDAVAKV 100
>UniRef50_P59797 Cluster: Selenoprotein V; n=6; Eutheria|Rep:
Selenoprotein V - Homo sapiens (Human)
Length = 346
Score = 37.1 bits (82), Expect = 0.48
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 162 VHVEYCGACDYGGHCLALAQIIRNDTPSALVLCK-RGRQ--GSFEVVVNDKLIYSK 320
+ V YCG C Y + L + + P+ L+ + R Q G FEV VN +L++SK
Sbjct: 265 IRVTYCGLCSYSLRYILLKKSLEQQFPNHLLFEEDRAAQATGEFEVFVNGRLVHSK 320
>UniRef50_A6CJI6 Cluster: Putative uncharacterized protein; n=1;
Bacillus sp. SG-1|Rep: Putative uncharacterized protein
- Bacillus sp. SG-1
Length = 42
Score = 36.7 bits (81), Expect = 0.64
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +3
Query: 276 GSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHD 374
G+FEV VN + +YSKL+T PD E+ ++H+
Sbjct: 9 GAFEVNVNGEKLYSKLETGVFPDIDEMIDLIHN 41
>UniRef50_UPI00006CF806 Cluster: selT/selW/selH selenoprotein domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: selT/selW/selH selenoprotein domain
containing protein - Tetrahymena thermophila SB210
Length = 241
Score = 36.3 bits (80), Expect = 0.84
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +3
Query: 249 LVLCKRGRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVHDV 377
+V+ + + G+FEV NDKLI+SK+++ +P E+ + ++
Sbjct: 199 MVISQISQSGAFEVFCNDKLIFSKIQSNRMPSLDEIIDPISNM 241
>UniRef50_A6G4H0 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 56
Score = 36.3 bits (80), Expect = 0.84
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 267 GRQGSFEVVVNDKLIYSKLKTMALPDYGEVAQVVH 371
G +G+FEV N +L+YSKL+ P Y EV ++++
Sbjct: 19 GDRGAFEVTFNGELVYSKLREGRFPLYAEVPKLIN 53
>UniRef50_Q7QSG1 Cluster: GLP_64_35175_29128; n=2; cellular
organisms|Rep: GLP_64_35175_29128 - Giardia lamblia ATCC
50803
Length = 2015
Score = 33.9 bits (74), Expect = 4.5
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 135 NEEKSFIPKVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIY 314
N+E+ F+ K+ CG +G C A+A + +DT V GR +E V DK++
Sbjct: 983 NQEQQFLKKLEKGDCGTVTFGLECTAIA--LSSDTNVYGVAMTDGRVTLYE-RVTDKVLM 1039
Query: 315 SKLKTMALPDYGE--VAQVVHDVSKGQEPRXNQRRTTNQLC 431
T A D + + Q + EP+ ++ +++ LC
Sbjct: 1040 KIRYTSAYHDQKQLHMEQYFDAIGVKMEPQLDRVVSSDSLC 1080
>UniRef50_A4BRV4 Cluster: SelT/selW/selH selenoprotein; n=8;
Bacteria|Rep: SelT/selW/selH selenoprotein - Nitrococcus
mobilis Nb-231
Length = 159
Score = 33.5 bits (73), Expect = 5.9
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +3
Query: 159 KVHVEYCGACDYGGHCLALAQIIRN--DTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTM 332
KV + YC C + +AQ + + A + + G F+V N KL++S+ K
Sbjct: 16 KVEIRYCTQCRWLLRSAWMAQELLTTFEQEIAELTLQPVTGGVFDVYANGKLVWSRKKAG 75
Query: 333 ALPDYGEVAQVVHD 374
P+ E+ Q+V D
Sbjct: 76 RFPEITELKQLVRD 89
>UniRef50_Q7QZL6 Cluster: GLP_159_2124_2369; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_159_2124_2369 - Giardia lamblia ATCC
50803
Length = 81
Score = 33.1 bits (72), Expect = 7.9
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +3
Query: 150 FIPKVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKT 329
F K+H C C + Q + A + G GSFEV ++ IYSKL+T
Sbjct: 5 FEMKLHFVMCLQCGSRPRYDGMRQYFKQKNVDAEFSFEAGPDGSFEVSMDGTQIYSKLET 64
Query: 330 MALPDYGEVAQVV 368
P E+ ++
Sbjct: 65 GKYPTPPELLAII 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,200,685
Number of Sequences: 1657284
Number of extensions: 13358244
Number of successful extensions: 27728
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 26947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27723
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 64615845515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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