Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J17
         (772 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3023|AAF50903.1|   95|Drosophila melanogaster CG15456-P...    72   1e-12
AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p pro...    29   7.1  
AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA...    29   7.1  
AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha ...    29   7.1  

>AE014298-3023|AAF50903.1|   95|Drosophila melanogaster CG15456-PA
           protein.
          Length = 95

 Score = 71.7 bits (168), Expect = 1e-12
 Identities = 29/77 (37%), Positives = 46/77 (59%)
 Frame = +3

Query: 159 KVHVEYCGACDYGGHCLALAQIIRNDTPSALVLCKRGRQGSFEVVVNDKLIYSKLKTMAL 338
           KV VEYCG C++ G C  L + +   +P   + C+ GR+GSFEV ++ +L++SKL  +A 
Sbjct: 3   KVEVEYCGICNFSGQCHLLREFLLASSPDLDISCRTGRRGSFEVSIDGQLVHSKLSCLAF 62

Query: 339 PDYGEVAQVVHDVSKGQ 389
           P +  V   V    +G+
Sbjct: 63  PQHASVLAQVQKAERGE 79


>AY069569-1|AAL39714.1|  476|Drosophila melanogaster LD29847p
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = -3

Query: 626 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 453
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


>AE014134-1100|AAF52389.2|  476|Drosophila melanogaster CG9539-PA
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = -3

Query: 626 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 453
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


>AB062670-1|BAB78518.1|  476|Drosophila melanogaster DSec61alpha
           protein.
          Length = 476

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = -3

Query: 626 YVVGARTNCPYKSAQYSGSLCAAVNLIKYEQTVQSIVSHFQKSNMYLTT*LFSIILAG 453
           Y  G R + P KSA+Y G   +    + Y   +  I+     SN+Y+ + + ++   G
Sbjct: 257 YFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLAVKFQG 314


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,272,088
Number of Sequences: 53049
Number of extensions: 614842
Number of successful extensions: 1252
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1252
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)