Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J15
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0519 + 3863113-3863498,3863587-3863602                           29   5.3  
04_04_0682 - 27229936-27231087,27231954-27232337                       28   7.0  

>07_01_0519 + 3863113-3863498,3863587-3863602
          Length = 133

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +2

Query: 260 DLCEAQGQVPVEIDLTVSADDKPPPLNLXXXXXXXXXRHYGDGD 391
           D   A    P  +     A+DKPPPL            H  DGD
Sbjct: 31  DAAAASSPTPATVVAAAFAEDKPPPLQKIEAAVTANKDHDDDGD 74


>04_04_0682 - 27229936-27231087,27231954-27232337
          Length = 511

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 15/41 (36%), Positives = 25/41 (60%)
 Frame = +2

Query: 395 ISTPDFGLIKEMLEKVSEVNLHSDECVENAPDELKDSPRTF 517
           +S+ D  +  +++ KV  V+ H++E  E  PD LKD  RT+
Sbjct: 142 LSSSDMAIQLDLIAKVRGVS-HAEEYFEELPDPLKDK-RTY 180


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,848,588
Number of Sequences: 37544
Number of extensions: 341369
Number of successful extensions: 735
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)