Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_J15
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    25   1.0  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.8  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    23   3.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   4.1  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   4.1  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.4  

>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = -1

Query: 260 HEELHAYWSTWTFFTKFTVRTLIKIYVSCGIISLHCR 150
           H++ H   +       F+ +   K+YVS G + +H R
Sbjct: 1   HQQFHCAAAEGQAKKSFSCKYCEKVYVSLGALKMHIR 37


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 656 ANELPKLLKPNDFIFDDVN 712
           +N++ K++  NDF FDDVN
Sbjct: 382 SNKMQKMVN-NDFNFDDVN 399


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 656 ANELPKLLKPNDFIFDDVN 712
           +N++ K++  NDF FDDVN
Sbjct: 382 SNKMQKMVN-NDFNFDDVN 399


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +2

Query: 656 ANELPKLLKPNDFIFDDVN 712
           +N++ K++  NDF FDDVN
Sbjct: 382 SNKMQKMVN-NDFNFDDVN 399


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +2

Query: 398 STPDFGLIKEMLEKVSEVNLHSDECVENAPDELKDSPRTFEA 523
           STP++          +E++    + V + P ELK SP  FE+
Sbjct: 370 STPEYDDTYMDSGYTNEIDFSFPDSVSDYPLELKGSPDGFES 411


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 233 TWTFFTKFTVRTLIKIY 183
           TW + T FTV  L+K++
Sbjct: 178 TWFWVTPFTVLPLLKVW 194


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 233 TWTFFTKFTVRTLIKIY 183
           TW + T FTV  L+K++
Sbjct: 178 TWFWVTPFTVLPLLKVW 194


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 621 KIKKMLY*SLNVPMNYPSYLNQMI 692
           K+K+M Y  +   +N  +YL+++I
Sbjct: 143 KLKEMFYLIIECSLNLETYLDKLI 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,493
Number of Sequences: 438
Number of extensions: 4101
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)