Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J12
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock pr... 303 8e-83
L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein. 298 3e-81
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 70 2e-12
Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical p... 68 8e-12
U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein. 68 8e-12
AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical ... 68 8e-12
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 66 3e-11
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 62 4e-10
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 62 4e-10
AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical... 60 2e-09
AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical... 60 2e-09
U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin cont... 50 2e-06
U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin cont... 50 2e-06
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 29 3.4
Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical pr... 28 7.8
>AC084153-6|AAK84594.1| 568|Caenorhabditis elegans Heat shock
protein protein 60 protein.
Length = 568
Score = 303 bits (744), Expect = 8e-83
Identities = 155/216 (71%), Positives = 176/216 (81%)
Frame = +1
Query: 82 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 261
MLRL R QT + R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNV
Sbjct: 1 MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53
Query: 262 ILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARA 441
I+EQSWGSPKITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVLARA
Sbjct: 54 IIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLARA 113
Query: 442 IAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAI 621
IAKEGFE I +G N +EIRRGVM AV+ V +LK +SK VTTPEEIAQVATISANGDT +
Sbjct: 114 IAKEGFESIRQGGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVV 173
Query: 622 GKLIADAMXKVXRDGVITVKDGKTLTDXLEIIEGMK 729
G LI+DAM KV GVITVKDGKTL D LE+IEGMK
Sbjct: 174 GNLISDAMKKVGTTGVITVKDGKTLNDELELIEGMK 209
>L36035-1|AAA28077.1| 568|Caenorhabditis elegans HSP60 protein.
Length = 568
Score = 298 bits (731), Expect = 3e-81
Identities = 153/216 (70%), Positives = 174/216 (80%)
Frame = +1
Query: 82 MLRLPRVVRQTVSLHKSYQLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNV 261
MLRL R QT + R YAKDV+FGA+ R ML GV++LADAV+VTMGPKGRNV
Sbjct: 1 MLRLARKGLQTAVV-------RSYAKDVKFGAEGRQAMLVGVNLLADAVSVTMGPKGRNV 53
Query: 262 ILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARA 441
I+EQSWGSPKITKDGVTVAK ++LKDK+QN+GAKL+Q+VAN NEEAGDGTT ATVL RA
Sbjct: 54 IIEQSWGSPKITKDGVTVAKSIDLKDKYQNLGAKLIQDVANKANEEAGDGTTCATVLTRA 113
Query: 442 IAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSKPVTTPEEIAQVATISANGDTAI 621
IAKEGFE+ S N +EIRRGVM AV+ V +LK +SK VTTPEEIAQVATISANGDT +
Sbjct: 114 IAKEGFERHSSRGNAVEIRRGVMNAVEVVVAELKKISKKVTTPEEIAQVATISANGDTVV 173
Query: 622 GKLIADAMXKVXRDGVITVKDGKTLTDXLEIIEGMK 729
G LI+DAM KV GVITVKDGKTL D LE+IEGMK
Sbjct: 174 GNLISDAMKKVGTTGVITVKDGKTLNDQLELIEGMK 209
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +1
Query: 214 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 393
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 394 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 567
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 568 PEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITVKDGKTLTDXLEIIE 720
E + + A S G + + + ++ D V++V D ++ E+I+
Sbjct: 161 RERLVETAQTSL-GSKIVNRSLRQ-FAEIAVDAVLSVADIESKDVNFEMIK 209
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +1
Query: 214 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 393
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 394 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 567
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 568 PEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITVKDGKTLTDXLEIIE 720
E + + A S G + + + ++ D V++V D ++ E+I+
Sbjct: 161 RERLVETAQTSL-GSKIVNRSLRQ-FAEIAVDAVLSVADIESKDVNFEMIK 209
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 69.7 bits (163), Expect = 2e-12
Identities = 49/171 (28%), Positives = 88/171 (51%), Gaps = 2/171 (1%)
Frame = +1
Query: 214 LADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQNVANNTN 393
+A+ + ++GP+G + +L G IT DG T+ + +++ Q+ AKL+ ++ + +
Sbjct: 45 VANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDV----QHHVAKLMVELSKSQD 100
Query: 394 EEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK--PVTT 567
E GDGTT VLA A+ +E + I +G +PI+I G LA E L +S PV
Sbjct: 101 HEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETLDSISDKFPVEN 160
Query: 568 PEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITVKDGKTLTDXLEIIE 720
E + + A S G + + + ++ D V++V D ++ E+I+
Sbjct: 161 RERLVETAQTSL-GSKIVNRSLRQ-FAEIAVDAVLSVADIESKDVNFEMIK 209
>Z68318-10|CAA92697.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 8e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 136 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 303
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 304 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 483
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 484 PIEIRRGVMLAVDAVKEKLKGMS 552
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>U25632-1|AAA93233.1| 529|Caenorhabditis elegans CCT-2 protein.
Length = 529
Score = 67.7 bits (158), Expect = 8e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 136 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 303
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 304 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 483
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 484 PIEIRRGVMLAVDAVKEKLKGMS 552
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>AL031268-2|CAA20331.1| 529|Caenorhabditis elegans Hypothetical
protein T21B10.7 protein.
Length = 529
Score = 67.7 bits (158), Expect = 8e-12
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Frame = +1
Query: 136 QLSRFYAKDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVIL----EQSWGSPKITKD 303
Q+ + A++ R G R G + D V T+GPKG + IL +S G K+T D
Sbjct: 5 QILKDNAQEER-GESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTND 63
Query: 304 GVTVAKGVELKDKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGAN 483
G T+ K + + N AK++ +++ + E GDGTT+ TVLA + KE + +++ +
Sbjct: 64 GATILKSIGV----DNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIH 119
Query: 484 PIEIRRGVMLAVDAVKEKLKGMS 552
P I G A+ +E LK S
Sbjct: 120 PQTIISGYRRALGIAQESLKKSS 142
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 157 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 336
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 337 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 516
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 517 VDAVKEKLKGMSKPVTTPEE--IAQVATISAN 606
++ L MS PV + + ++AT S N
Sbjct: 140 AAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 2/152 (1%)
Frame = +1
Query: 157 KDVRFGADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELK 336
KD VR + +ADAV ++GP+G + +++ G IT DG T+ + +
Sbjct: 24 KDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVI 83
Query: 337 DKFQNIGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLA 516
AK++ ++ + EAGDGTTT V+A A+ +SKG +P I A
Sbjct: 84 HPT----AKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSA 139
Query: 517 VDAVKEKLKGMSKPVTTPEE--IAQVATISAN 606
++ L MS PV + + ++AT S N
Sbjct: 140 AAEAEKILDEMSSPVDLSNDALLNKMATTSLN 171
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 172 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 351
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 352 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 531
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 532 EKLKGMSKPVT-TPEEIAQVATISANGDTAIGKLI 633
E +K +S+ ++ T + I + + ++A + K+I
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAAKTSMSSKII 165
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 62.1 bits (144), Expect = 4e-10
Identities = 41/155 (26%), Positives = 79/155 (50%), Gaps = 1/155 (0%)
Frame = +1
Query: 172 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 351
G +R+ + +A+ V ++GP G + +L G +T DG T+ K +E+ ++
Sbjct: 18 GQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEV----EH 73
Query: 352 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVK 531
K++ +A +EE GDGTT+ ++A + K E + + +P I G L A K
Sbjct: 74 PAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRL---ACK 130
Query: 532 EKLKGMSKPVT-TPEEIAQVATISANGDTAIGKLI 633
E +K +S+ ++ T + I + + ++A + K+I
Sbjct: 131 EAVKYISENISFTSDSIGRQSVVNAAKTSMSSKII 165
>AF067947-11|AAO25994.1| 455|Caenorhabditis elegans Hypothetical
protein T10B5.5b protein.
Length = 455
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/147 (24%), Positives = 72/147 (48%)
Frame = +1
Query: 196 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 375
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 376 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 555
+A + + E GDGTT+ VLA I K+ I G +P + R + A + + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 556 PVTTPEEIAQVATISANGDTAIGKLIA 636
+ E+ ++ + T KL++
Sbjct: 142 KINGETELREM-LVKCAATTLSSKLVS 167
>AF067947-10|AAC19232.2| 535|Caenorhabditis elegans Hypothetical
protein T10B5.5a protein.
Length = 535
Score = 60.1 bits (139), Expect = 2e-09
Identities = 36/147 (24%), Positives = 72/147 (48%)
Frame = +1
Query: 196 LQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLVQN 375
+ ++AD++ T+GP+G + ++ S G+ I+ DG T+ K +++ A + +
Sbjct: 26 INACQVVADSIRTTLGPRGLDKLIVDSKGATTISNDGATILKLLDIVFP----AASTMVD 81
Query: 376 VANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGMSK 555
+A + + E GDGTT+ VLA I K+ I G +P + R + A + + L +
Sbjct: 82 IARSQDAEVGDGTTSVVVLAAEILKQMKPFIEDGVHPQLLIRAIGKACEKTLKNLADLEI 141
Query: 556 PVTTPEEIAQVATISANGDTAIGKLIA 636
+ E+ ++ + T KL++
Sbjct: 142 KINGETELREM-LVKCAATTLSSKLVS 167
>U13070-3|AAM22058.1| 429|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform b protein.
Length = 429
Score = 50.0 bits (114), Expect = 2e-06
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Frame = +1
Query: 190 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 369
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 370 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGM 549
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 550 SKPVTTPEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITV-KDGKTLTDXLEIIEGM 726
K ++ V T + + +AD + + D V+ + +DG+ L ++E M
Sbjct: 138 KKEAPVERDLL-VEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGE--EPDLHMVEKM 194
Query: 727 K 729
+
Sbjct: 195 E 195
>U13070-2|AAC46642.1| 539|Caenorhabditis elegans Chaperonin
containing tcp-1 protein6, isoform a protein.
Length = 539
Score = 50.0 bits (114), Expect = 2e-06
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Frame = +1
Query: 190 LMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQNIGAKLV 369
L + G L D + +GPKG +L G K+TKDG + + + Q+ A ++
Sbjct: 22 LNISGARGLQDVMRSNLGPKGTLKMLVSGAGDIKLTKDGNVLLHEMAI----QHPTASMI 77
Query: 370 QNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAVDAVKEKLKGM 549
+ ++ GDGTT+ +L + K+ + +G +P + G A E L+
Sbjct: 78 AKASTAQDDVTGDGTTSTVLLIGELLKQAESLVLEGLHPRIVTEGFEWANTKTLELLEKF 137
Query: 550 SKPVTTPEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITV-KDGKTLTDXLEIIEGM 726
K ++ V T + + +AD + + D V+ + +DG+ L ++E M
Sbjct: 138 KKEAPVERDLL-VEVCRTALRTKLHQKLADHITECVVDAVLAIRRDGE--EPDLHMVEKM 194
Query: 727 K 729
+
Sbjct: 195 E 195
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 48.0 bits (109), Expect = 7e-06
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 3/184 (1%)
Frame = +1
Query: 172 GADVRALMLQGVDILADAVAVTMGPKGRNVILEQSWGSPKITKDGVTVAKGVELKDKFQN 351
G V+ + +AD + ++GP+ +L G +T DG + + + +K
Sbjct: 21 GHQVQIGNINACKTIADVIRTSLGPRAMLKMLMDPMGGIVMTNDGNAILREITVKHP--- 77
Query: 352 IGAKLVQNVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRRGVMLAV-DAV 528
AK + +A +EE GDGTT+ +LA + + + +P I + A+ D +
Sbjct: 78 -AAKSMIEIARTQDEETGDGTTSVIILAGEVMAHAQTYLEQKTHPTLIIKAYRQALEDMI 136
Query: 529 KEKLKGMSKPV--TTPEEIAQVATISANGDTAIGKLIADAMXKVXRDGVITVKDGKTLTD 702
+ SK V T EIA+V S G I K + D + V T++ K
Sbjct: 137 QWSENKFSKTVDITDDAEIAKVVK-SCLGTKMISKWM-DLAVNISIQAVKTIRVEKAGVR 194
Query: 703 XLEI 714
++I
Sbjct: 195 EIDI 198
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 338 SLSSTPLATVTPSFVIFGDPQDCSKITFLPFGPIVTATASARMST 204
S + P TVTP V + D + +P PIVT T +A ST
Sbjct: 610 SSPTVPTTTVTPEVVREDEDYDYTNEFAIPNEPIVTTTTTAIAST 654
>Z48009-4|CAA88084.1| 329|Caenorhabditis elegans Hypothetical
protein AH6.6 protein.
Length = 329
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -2
Query: 187 LLHQRQTSHLWHKILKVDMIYGEKQFDEQH 98
L+HQ ++S W + LK+ +I EKQ + H
Sbjct: 292 LVHQIRSSR-WRRALKIKVIKNEKQTQDDH 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.133 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,779,682
Number of Sequences: 27780
Number of extensions: 281945
Number of successful extensions: 953
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 935
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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