Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J11
(417 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical pr... 57 6e-09
AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical... 48 3e-06
AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical ... 45 3e-05
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 4.1
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 4.1
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 4.1
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 4.1
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 4.1
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 4.1
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 27 4.1
AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger t... 27 4.1
AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger t... 27 4.1
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 27 5.5
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 27 5.5
U58742-1|AAB36857.2| 170|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41508-1|AAG00027.3| 944|Caenorhabditis elegans Set (trithorax/... 27 7.2
AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical ... 27 7.2
>Z82256-2|CAB05115.1| 62|Caenorhabditis elegans Hypothetical
protein B0513.3 protein.
Length = 62
Score = 56.8 bits (131), Expect = 6e-09
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +1
Query: 61 MAKSKNHTNHNQNRKAHRNGIKKPRK 138
MAKSKNHTNHNQN+KAHRNGI KP+K
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGITKPKK 26
>AL032657-13|CAB76744.1| 87|Caenorhabditis elegans Hypothetical
protein Y47H9C.14 protein.
Length = 87
Score = 48.0 bits (109), Expect = 3e-06
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 67 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSK 174
K +NHTNHN+N KAHRNGI KP+K H + GS+
Sbjct: 14 KPENHTNHNRNNKAHRNGITKPKK--HIFLSIEGSR 47
>AL032625-6|CAN86641.1| 167|Caenorhabditis elegans Hypothetical
protein Y37H9A.5 protein.
Length = 167
Score = 44.8 bits (101), Expect = 3e-05
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 67 KSKNHTNHNQNRKAHRNGIKKPR---KTRHESTLVHGSKIFKESKVLQEG*PEASQATRE 237
KSKNHTNHNQN AHR GI KP+ VH + S++ Q P ++ R
Sbjct: 80 KSKNHTNHNQNNTAHRIGITKPKIFLSIEGSRRQVHQEPPLRGSRLPQCKIPRLQRSDRS 139
Query: 238 G 240
G
Sbjct: 140 G 140
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 662 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 721
Query: 212 LKPAK 226
P+K
Sbjct: 722 KDPSK 726
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical
protein T05A10.1i protein.
Length = 1927
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical
protein T05A10.1j protein.
Length = 1509
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 730 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 789
Query: 212 LKPAK 226
P+K
Sbjct: 790 KDPSK 794
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical
protein T05A10.1c protein.
Length = 1692
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 288 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 347
Query: 212 LKPAK 226
P+K
Sbjct: 348 KDPSK 352
>AY389810-1|AAR28682.1| 781|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 781
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 310 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 369
Query: 212 LKPAK 226
P+K
Sbjct: 370 KDPSK 374
>AY389809-1|AAR28681.1| 909|Caenorhabditis elegans zinc finger
transcription factorSMA-9 protein.
Length = 909
Score = 27.5 bits (58), Expect = 4.1
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 38 KWIENASKWQSQRIIQII-TKTAKLTEMVSKSQG-RPGTNPPLCMDPKFLRNQRFCKKGN 211
+++ENA ++Q++ IIQ + ++TEM+ + + G P L + + + + K+ N
Sbjct: 662 QYLENAEEYQAKGIIQALPCDNLEVTEMLKQQETIMKGQVPDLLVSTQAVLHHCSGKRDN 721
Query: 212 LKPAK 226
P+K
Sbjct: 722 KDPSK 726
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 121 YHFCELCGFGYDLYDSL 71
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 27.1 bits (57), Expect = 5.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 121 YHFCELCGFGYDLYDSL 71
Y+FC++CGFG DS+
Sbjct: 1685 YYFCKVCGFGSTSADSV 1701
>U58742-1|AAB36857.2| 170|Caenorhabditis elegans Hypothetical
protein F31A3.3 protein.
Length = 170
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 70 SKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFKESKVLQEG*P 213
++ +N+NQ ++ +KKP K + L +K FKE V+++ P
Sbjct: 17 NRKSSNNNQENAVNQMVVKKPIKRKTALPLQVPAKKFKEVVVVEQPSP 64
>U41508-1|AAG00027.3| 944|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 19
protein.
Length = 944
Score = 26.6 bits (56), Expect = 7.2
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +1
Query: 4 PADASVLSSXI*VD*KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLVHGSKIFK 183
PA S S+ + D +R+ SKN+ ++ + + + P +TRH+ + S F
Sbjct: 765 PASTSQESTGM-RDTQRLNKVLSKNNIGELESPRLNGTRVLSPPRTRHQISNAIDSDAFN 823
Query: 184 ESKVLQE 204
+ VL +
Sbjct: 824 DMPVLTQ 830
>AC006712-8|AAU20838.1| 450|Caenorhabditis elegans Hypothetical
protein Y119C1B.3 protein.
Length = 450
Score = 26.6 bits (56), Expect = 7.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 49 KRIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST 156
K+ K A + NH N ++N NG + P+KTR S+
Sbjct: 376 KKSKKAAAANHKNASRN-----NGNETPKKTRRSSS 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,813,305
Number of Sequences: 27780
Number of extensions: 119953
Number of successful extensions: 453
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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