Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J06
(531 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL928603-2|CAI41478.1| 236|Homo sapiens novel protein protein. 69 1e-11
AL672138-4|CAI41511.1| 236|Homo sapiens novel protein protein. 69 1e-11
AL928603-1|CAI41477.1| 188|Homo sapiens novel protein protein. 68 2e-11
AL672138-3|CAI41510.1| 188|Homo sapiens novel protein protein. 68 2e-11
BC012469-1|AAH12469.1| 236|Homo sapiens Yip1 domain family, mem... 66 7e-11
BC004875-1|AAH04875.1| 244|Homo sapiens Yip1 domain family, mem... 34 0.36
AK098486-1|BAC05315.1| 244|Homo sapiens protein ( Homo sapiens ... 34 0.36
AB072898-1|BAE45710.1| 244|Homo sapiens putative protein produc... 34 0.36
BC024737-1|AAH24737.1| 257|Homo sapiens Yip1 domain family, mem... 31 1.9
BC014253-1|AAH14253.1| 257|Homo sapiens Yip1 domain family, mem... 31 1.9
BC007829-1|AAH07829.1| 257|Homo sapiens Yip1 domain family, mem... 31 1.9
AY640928-1|AAV51259.1| 257|Homo sapiens FINGER5 variant C protein. 31 1.9
AY640927-1|AAV51258.1| 257|Homo sapiens FINGER5 variant B protein. 31 1.9
AY640926-1|AAV51257.1| 257|Homo sapiens FINGER5 variant A protein. 31 1.9
AY640925-1|AAV51256.1| 257|Homo sapiens FINGER5 protein. 31 1.9
AY358863-1|AAQ89222.1| 257|Homo sapiens SB140 protein. 31 1.9
AK054576-1|BAB70763.1| 257|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB014733-1|BAB20270.1| 77|Homo sapiens SMAP-5 protein. 31 1.9
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 31 3.3
AK223515-1|BAD97235.1| 257|Homo sapiens golgi membrane protein ... 31 3.3
AF140225-1|AAG48521.1| 257|Homo sapiens unknown protein. 31 3.3
>AL928603-2|CAI41478.1| 236|Homo sapiens novel protein protein.
Length = 236
Score = 68.5 bits (160), Expect = 1e-11
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = +2
Query: 11 IILFSTQNTFLFFLRLVISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWL 190
++L + F +RL + ++ F W+ A+T FL DSQP ++ALAVYP+ LFYF++SW+
Sbjct: 170 LVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWM 229
Query: 191 VVS 199
+++
Sbjct: 230 ILT 232
>AL672138-4|CAI41511.1| 236|Homo sapiens novel protein protein.
Length = 236
Score = 68.5 bits (160), Expect = 1e-11
Identities = 26/63 (41%), Positives = 44/63 (69%)
Frame = +2
Query: 11 IILFSTQNTFLFFLRLVISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWL 190
++L + F +RL + ++ F W+ A+T FL DSQP ++ALAVYP+ LFYF++SW+
Sbjct: 170 LVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWM 229
Query: 191 VVS 199
+++
Sbjct: 230 ILT 232
>AL928603-1|CAI41477.1| 188|Homo sapiens novel protein protein.
Length = 188
Score = 68.1 bits (159), Expect = 2e-11
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +2
Query: 11 IILFSTQNTFLFFLRLVISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWL 190
++L + F +RL + ++ F W+ A+T FL DSQP ++ALAVYP+ LFYF++SW+
Sbjct: 127 LVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWM 186
Query: 191 VV 196
++
Sbjct: 187 IL 188
>AL672138-3|CAI41510.1| 188|Homo sapiens novel protein protein.
Length = 188
Score = 68.1 bits (159), Expect = 2e-11
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +2
Query: 11 IILFSTQNTFLFFLRLVISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWL 190
++L + F +RL + ++ F W+ A+T FL DSQP ++ALAVYP+ LFYF++SW+
Sbjct: 127 LVLLADPGPVNFMVRLFVVIVMFAWSIVASTAFLADSQPPNRRALAVYPVFLFYFVISWM 186
Query: 191 VV 196
++
Sbjct: 187 IL 188
>BC012469-1|AAH12469.1| 236|Homo sapiens Yip1 domain family, member
6 protein.
Length = 236
Score = 66.1 bits (154), Expect = 7e-11
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +2
Query: 11 IILFSTQNTFLFFLRLVISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFYFILSWL 190
++L + F +RL + ++ F W+ A+T L DSQP ++ALAVYP+ LFYF++SW+
Sbjct: 170 LVLLADPGPVNFMVRLFVVIVMFAWSIVASTALLADSQPPNRRALAVYPVFLFYFVISWM 229
Query: 191 VVS 199
+++
Sbjct: 230 ILT 232
>BC004875-1|AAH04875.1| 244|Homo sapiens Yip1 domain family, member
4 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.36
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 59 VISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFY 172
+I + G WA ++A L + + KK L +YPI L Y
Sbjct: 197 LIKLFGVFWAAYSAASLLVGEEFKTKKPLLIYPIFLLY 234
>AK098486-1|BAC05315.1| 244|Homo sapiens protein ( Homo sapiens
cDNA FLJ25620 fis, clone STM02634. ).
Length = 244
Score = 33.9 bits (74), Expect = 0.36
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 59 VISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFY 172
+I + G WA ++A L + + KK L +YPI L Y
Sbjct: 197 LIKLFGVFWAAYSAASLLVGEEFKTKKPLLIYPIFLLY 234
>AB072898-1|BAE45710.1| 244|Homo sapiens putative protein product
of Nbla11189 protein.
Length = 244
Score = 33.9 bits (74), Expect = 0.36
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 59 VISMIGFIWATFAATKFLGDSQPEGKKALAVYPICLFY 172
+I + G WA ++A L + + KK L +YPI L Y
Sbjct: 197 LIKLFGVFWAAYSAASLLVGEEFKTKKPLLIYPIFLLY 234
>BC024737-1|AAH24737.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>BC014253-1|AAH14253.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>BC007829-1|AAH07829.1| 257|Homo sapiens Yip1 domain family, member
5 protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AY640928-1|AAV51259.1| 257|Homo sapiens FINGER5 variant C protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AY640927-1|AAV51258.1| 257|Homo sapiens FINGER5 variant B protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AY640926-1|AAV51257.1| 257|Homo sapiens FINGER5 variant A protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AY640925-1|AAV51256.1| 257|Homo sapiens FINGER5 protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AY358863-1|AAQ89222.1| 257|Homo sapiens SB140 protein.
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AK054576-1|BAB70763.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ30014 fis, clone 3NB692000330, weakly similar to
YIP1 PROTEIN. ).
Length = 257
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AB014733-1|BAB20270.1| 77|Homo sapiens SMAP-5 protein.
Length = 77
Score = 31.5 bits (68), Expect = 1.9
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 10 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPCALLY 68
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 69 GVFALISV 76
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 30.7 bits (66), Expect = 3.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -2
Query: 440 HRNVLLCLKFQGFFFKSVQKNSQLKKTILN 351
H VL C +GFF +S+Q+N Q K+ + N
Sbjct: 143 HYGVLACEGCKGFFRRSIQQNIQYKRCLKN 172
>AK223515-1|BAD97235.1| 257|Homo sapiens golgi membrane protein
SB140 variant protein.
Length = 257
Score = 30.7 bits (66), Expect = 3.3
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
Frame = +2
Query: 8 PIILFSTQNTFLFFLRLVISMI---GFI-WATFAATK-FLGDSQPEGKKALAVYPICLFY 172
P+IL S+ +F L+ ++ +I G I W +F+A+K F+ EG++ L YP L Y
Sbjct: 190 PMILLSSF-AVIFSLQGMVGIILTAGIIGWCSFSASKIFISALAMEGQQLLVAYPRALLY 248
Query: 173 FILSWLVV 196
+ + + V
Sbjct: 249 GVFALISV 256
>AF140225-1|AAG48521.1| 257|Homo sapiens unknown protein.
Length = 257
Score = 30.7 bits (66), Expect = 3.3
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 14 ILFSTQNTFLFFLRLVISMIGFIWATFAATK-FLGDSQPEGKKALAVYPICLFYFILSWL 190
++FS Q + + L +IG W +F+A+K F+ EG++ L YP L Y + + +
Sbjct: 199 VIFSLQG--MVGIILTAGIIG--WCSFSASKIFISALAMEGQQLLVAYPCALLYGVFALI 254
Query: 191 VV 196
V
Sbjct: 255 SV 256
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,080,227
Number of Sequences: 237096
Number of extensions: 1064464
Number of successful extensions: 1727
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1727
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -