Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J03
(784 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual 138 1e-33
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 105 9e-24
SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual 76 7e-15
SPBC23E6.03c |nta1||protein N-terminal amidase Nta1 |Schizosacch... 44 2e-05
SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces pombe... 31 0.14
SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces pombe... 28 1.7
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 5.3
SPBC4B4.01c |||fumble family pantothenate kinase |Schizosaccharo... 26 7.0
SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces po... 26 7.0
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 25 9.3
>SPBC651.02 |||nitrilase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 276
Score = 138 bits (333), Expect = 1e-33
Identities = 73/190 (38%), Positives = 111/190 (58%), Gaps = 1/190 (0%)
Frame = +1
Query: 217 AVCQMTSVADKAANLKVVEGIIDSAAKENVQMLFFPEACDYICDNKKDIVNFSEPIFGGE 396
AV Q+ S NL + + +I AA + + +FFPEA D+I N + + + +
Sbjct: 5 AVAQLNSSGSILKNLAICKELISQAAAKGAKCIFFPEASDFIAHNSDEAIELTNHPDCSK 64
Query: 397 IVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDD-KGSLVQMYRKLHLFDVEI 573
+ RE A K+ +++++ VHE K NK+ N+ + I+ G ++ Y K HLFDVEI
Sbjct: 65 FIRDVRESATKHSIFVNIC-VHEPS-KVKNKLLNSSLFIEPLHGEIISRYSKAHLFDVEI 122
Query: 574 PERNVRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFPELSTSLSIMSADILTFPSA 753
+ LKES+ + G+ I+ P TP+GK+G AIC+D+RFPE + L M A I+T+PSA
Sbjct: 123 -KNGPTLKESNTTLRGEAILPPCKTPLGKVGSAICFDIRFPEQAIKLRNMGAHIITYPSA 181
Query: 754 FTQATGEAXW 783
FT+ TG A W
Sbjct: 182 FTEKTGAAHW 191
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 105 bits (251), Expect = 9e-24
Identities = 64/194 (32%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Frame = +1
Query: 211 RIAVCQMTSVADKAANLKVVEGIIDSAAKENVQMLFFPEACDYICDNKKDIVNFSEPIFG 390
RI + Q+ + DK+ NL++ + AAK ++ PE + ++EPI
Sbjct: 45 RIGLVQLANTKDKSENLQLARLKVLEAAKNGSNVIVLPEIFNSPYGTGY-FNQYAEPI-- 101
Query: 391 GEIVGKYREL---AEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDDKGSLVQMYRKLHLF 561
E Y+ L A+ +L G + E+ + K+YNT ++ D G L+ ++RK+HLF
Sbjct: 102 EESSPSYQALSSMAKDTKTYLFGGSIPERKD---GKLYNTAMVFDPSGKLIAVHRKIHLF 158
Query: 562 DVEIPERNVRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFPELSTSLSIMSADILT 741
D++IP V +ESD + GD + VDT GK G+ ICYD+RFPEL+ + ++
Sbjct: 159 DIDIPG-GVSFRESDSLSPGDAMTM-VDTEYGKFGLGICYDIRFPELAMIAARNGCSVMI 216
Query: 742 FPSAFTQATGEAXW 783
+P AF +TG W
Sbjct: 217 YPGAFNLSTGPLHW 230
>SPCC965.09 |||nitrilase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 272
Score = 75.8 bits (178), Expect = 7e-15
Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 6/181 (3%)
Frame = +1
Query: 214 IAVCQMT-SVADKAANLKVVEGIIDSAAKEN--VQMLFFPE--ACDYICDNKKDIVNFSE 378
IA QM V D NL+ + + + N ++ FPE Y C N +E
Sbjct: 5 IACVQMAPKVCDVKHNLQKMSSYVHEVMESNPSTNLILFPELITSGYECGNT--FTQIAE 62
Query: 379 PIFGGEIVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDDKGSLVQMYRKLHL 558
G LA KY V + + G EK+EK SN +YN+ I I + G+L +YRK+HL
Sbjct: 63 IAGEGPSFKTMSNLAAKYHVNI-IYGFPEKEEKQSNIIYNSCIYITENGNLGGVYRKVHL 121
Query: 559 FDVEIPERNVRLKESDFSNAGDHIVAPV-DTPVGKIGMAICYDMRFPELSTSLSIMSADI 735
FD ER K SDF P+ +T GK+G+ IC+D FPE++ ++ AD+
Sbjct: 122 FDT---ERKHFKKGSDF---------PIFETSFGKLGVMICWDTAFPEVARIHALNGADL 169
Query: 736 L 738
L
Sbjct: 170 L 170
>SPBC23E6.03c |nta1||protein N-terminal amidase Nta1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 286
Score = 44.4 bits (100), Expect = 2e-05
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Frame = +1
Query: 286 SAAKENVQMLFFPEAC--DYICDNKKDIVNFSEPIFGGEI--VGKYRELAEKYGVWLSMG 453
S A ++V++L FPE C Y N + I F E + + +E++E+Y + +G
Sbjct: 30 SEALQSVKLLVFPEMCLTGYNFKNSESIQPFLENVTSNHCPSIQFAQEVSEQYRCYTIIG 89
Query: 454 GVHEKDEKNSNKMYNTHIIIDDKGSLVQMYRKLHLFDVEIPERNVRLKESDFSNAGDHIV 633
++ + +YN+ +I K L+ +Y K LF+ +++ + FS
Sbjct: 90 FPEFQNSNGISTLYNSTALISPKKELLNVYHKHFLFET---DKSWATEGKGFS------F 140
Query: 634 APVDTPVGKIGMAICYDM 687
P +G I MAIC D+
Sbjct: 141 EPCIPELGPISMAICMDI 158
>SPACUNK4.12c |mug138||metallopeptidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 31.5 bits (68), Expect = 0.14
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +1
Query: 376 EPIFGGEIVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHII-IDDK--GSLVQMYR 546
+P+F ++ K + + G ++ V K+EKNS MYN I +DD+ G+L ++ R
Sbjct: 714 KPVFASQLSRKRAIIVPEGGNYIYKTVVPNKEEKNSAIMYNLQISQLDDERSGALTRLAR 773
Query: 547 KL 552
++
Sbjct: 774 QI 775
>SPBC20F10.05 |||DuF1740 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 972
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/37 (35%), Positives = 26/37 (70%)
Frame = -3
Query: 668 IPIFPTGVSTGATIWSPAFEKSLSFNLTFLSGISTSK 558
+P+FP G+ST + W +++K + +NL F G+++S+
Sbjct: 490 VPLFPPGISTNS--WFASYDKGI-YNLLF--GMASSE 521
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.2 bits (55), Expect = 5.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 486 QNVQHAHNNR*QRIPCTNVQETTSFRCRDT 575
+NV H+ + IP + E SFR +DT
Sbjct: 132 ENVPHSPQSSNDAIPVIKITEENSFRVKDT 161
>SPBC4B4.01c |||fumble family pantothenate kinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 25.8 bits (54), Expect = 7.0
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 9/52 (17%)
Frame = +1
Query: 412 RELAEKYGVWLSMGGVH--------EKD-EKNSNKMYNTHIIIDDKGSLVQM 540
R+L++ VWL++ G +KD +NK + THI +D GSL ++
Sbjct: 22 RQLSQPPSVWLNLTGARIIENEGQFDKDIALPNNKSHVTHIAVDIGGSLAKV 73
>SPBC336.11 |||GARP complex subunit Vps52 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 508
Score = 25.8 bits (54), Expect = 7.0
Identities = 12/29 (41%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -3
Query: 635 ATIWSPAFEKSLSFNLTFLSG-ISTSKRC 552
AT+++ FEK+L F+ +++G IS+S C
Sbjct: 317 ATVFAAIFEKTLHFSRKYITGLISSSIDC 345
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 25.4 bits (53), Expect = 9.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +1
Query: 133 PLNTFRNILRLDFKRHFCKTPVMSSKRIA 219
P+ F I ++ KR F K P M+ + IA
Sbjct: 827 PITIFEAIRKILKKREFAKKPTMTKRAIA 855
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,389,577
Number of Sequences: 5004
Number of extensions: 75916
Number of successful extensions: 222
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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