Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_J03
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical... 188 4e-48
AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and... 188 4e-48
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z69904-2|CAD57718.1| 298|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical... 31 1.2
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z77652-9|CAB01116.1| 220|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81544-5|CAB04430.2| 323|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81544-4|CAB04431.2| 329|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical pr... 28 8.7
AF078785-6|AAC27094.1| 337|Caenorhabditis elegans Serpentine re... 28 8.7
AF024503-15|AAG24087.2| 289|Caenorhabditis elegans Serpentine r... 28 8.7
>AL132860-11|CAB60517.1| 440|Caenorhabditis elegans Hypothetical
protein Y56A3A.13 protein.
Length = 440
Score = 188 bits (458), Expect = 4e-48
Identities = 93/201 (46%), Positives = 129/201 (64%)
Frame = +1
Query: 181 FCKTPVMSSKRIAVCQMTSVADKAANLKVVEGIIDSAAKENVQMLFFPEACDYICDNKKD 360
F +T IAVCQMTS D N + + +I+ A ++ +M+F PE D+I NK +
Sbjct: 6 FRRTMATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNE 65
Query: 361 IVNFSEPIFGGEIVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDDKGSLVQM 540
++ + E + KYRELA K+ +WLS+GG+H KD ++ +NTH+IID G
Sbjct: 66 QIDLAMAT-DCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAE 124
Query: 541 YRKLHLFDVEIPERNVRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFPELSTSLSI 720
Y KLHLFD+EIP + VRL ES+FS AG ++ PVDTP+G++G++ICYD+RFPELS
Sbjct: 125 YNKLHLFDLEIPGK-VRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRK 183
Query: 721 MSADILTFPSAFTQATGEAXW 783
A +L+FPSAFT TG A W
Sbjct: 184 RGAQLLSFPSAFTLNTGLAHW 204
>AF069986-1|AAC39136.1| 440|Caenorhabditis elegans nitrilase and
fragile histidinetriad fusion protein NitFhit protein.
Length = 440
Score = 188 bits (458), Expect = 4e-48
Identities = 93/201 (46%), Positives = 129/201 (64%)
Frame = +1
Query: 181 FCKTPVMSSKRIAVCQMTSVADKAANLKVVEGIIDSAAKENVQMLFFPEACDYICDNKKD 360
F +T IAVCQMTS D N + + +I+ A ++ +M+F PE D+I NK +
Sbjct: 6 FRRTMATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNE 65
Query: 361 IVNFSEPIFGGEIVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDDKGSLVQM 540
++ + E + KYRELA K+ +WLS+GG+H KD ++ +NTH+IID G
Sbjct: 66 QIDLAMAT-DCEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAE 124
Query: 541 YRKLHLFDVEIPERNVRLKESDFSNAGDHIVAPVDTPVGKIGMAICYDMRFPELSTSLSI 720
Y KLHLFD+EIP + VRL ES+FS AG ++ PVDTP+G++G++ICYD+RFPELS
Sbjct: 125 YNKLHLFDLEIPGK-VRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFPELSLWNRK 183
Query: 721 MSADILTFPSAFTQATGEAXW 783
A +L+FPSAFT TG A W
Sbjct: 184 RGAQLLSFPSAFTLNTGLAHW 204
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 53.6 bits (123), Expect = 2e-07
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Frame = +1
Query: 268 VEGIIDSAAKENVQMLFFPEACDY---ICDNKK-DIVNFSEPIFGGEIVGKYRELAEKYG 435
V +I++AA ++ EA C ++ F+E ++ G +LA K+
Sbjct: 102 VGAMIEAAASAGANVIGLQEAWTMPFAFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHD 161
Query: 436 VWLSMGGVHEKDEKNSNKMYNTHIIIDDKGSLVQMYRKLHLFDVEIPERNVRLKESDFSN 615
+ + + + E+DE+ + ++NT ++I G ++ RK H+ V + ES +
Sbjct: 162 IVI-ISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLGH 220
Query: 616 AGDHIVAPV-DTPVGKIGMAICYDMRFPELSTSLSIMSADILTFPSAFTQATGEAXW 783
PV +T G+IG+ ICY P+ ++ A+I+ PSA A E W
Sbjct: 221 -------PVFETKYGRIGINICYGRHHPQNWMMYALNGAEIIFNPSATVGALSEPLW 270
>Z69904-2|CAD57718.1| 298|Caenorhabditis elegans Hypothetical
protein ZK20.2 protein.
Length = 298
Score = 31.1 bits (67), Expect = 0.93
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 405 SHNLTTKYRLRKVYYILFVITDVVACFWKEKHLNIFFGSTIND-AFDNF*IGRFVSNRS 232
+H LTTK + +Y +I V W+ H NIF + D AF+ +G+ S
Sbjct: 57 NHYLTTKELISSIYSSAHLIKAVPRQHWELDHKNIFIQQRLRDGAFEEIMMGQLKCRNS 115
>Z81106-5|CAB03223.3| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = -1
Query: 703 SAQGSAYHNI*PYQFSLQEYRLVPQYGRQHSRSHSPLI*RFSPVSLHRKDVVSCTFVQGI 524
S Y N+ PY S + PQ +Q+S + SP + SPVS K + V G
Sbjct: 217 SPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTSSPPVSMHSPVSQDFKSTIINGHVMGA 276
Query: 523 LCHLL 509
H L
Sbjct: 277 HHHHL 281
>AL033536-12|CAD45609.2| 432|Caenorhabditis elegans Hypothetical
protein R06C1.6 protein.
Length = 432
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = -1
Query: 703 SAQGSAYHNI*PYQFSLQEYRLVPQYGRQHSRSHSPLI*RFSPVSLHRKDVVSCTFVQGI 524
S Y N+ PY S + PQ +Q+S + SP + SPVS K + V G
Sbjct: 217 SPPNHGYPNMSPYMTSQMNSPMHPQLQQQNSLTSSPPVSMHSPVSQDFKSTIINGHVMGA 276
Query: 523 LCHLL 509
H L
Sbjct: 277 HHHHL 281
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 30.3 bits (65), Expect = 1.6
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 10/190 (5%)
Frame = +1
Query: 211 RIAVCQM-TSVADKAANLKVVEGIIDSAAKENVQMLFFPEAC--DYICDNKKDIVNFSEP 381
+IA+ Q T + DK A L+ V+ ++ AA +++ FPEA Y N I +
Sbjct: 3 KIAIVQAGTPLFDKPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYPKWNSFGITMGTRT 62
Query: 382 IFGGEIVGKYRELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDD-KGSLVQMYRKLHL 558
G + +Y E A + G K ++ N HI+I + +Y +
Sbjct: 63 PEGRKEFKRYFENA------IEENGEESKLIESLAAQNNIHIVIGVVEREASTLYCSVFF 116
Query: 559 FDVE--IPERNVRLK---ESDFSNAGDHIVAPV-DTPVGKIGMAICYDMRFPELSTSLSI 720
+ + + L E GD PV T VGKIG AIC++ P +L
Sbjct: 117 YSPSGYLGKHRKLLPTALERCVWGQGDGSTMPVFSTSVGKIGSAICWENYMPLYRMTLYS 176
Query: 721 MSADILTFPS 750
I P+
Sbjct: 177 KEIQIYLAPT 186
>Z77652-9|CAB01116.1| 220|Caenorhabditis elegans Hypothetical
protein C06B3.6 protein.
Length = 220
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 412 RELAEKYGVWLSMGGVHEKDEKNSNKMYNTHIIIDDK 522
RE+ + Y W S+G VH D N +K N+ I + K
Sbjct: 81 REIPDLYFAWWSLGNVHSHDCVNHSKPVNSSQIDNAK 117
>Z81544-5|CAB04430.2| 323|Caenorhabditis elegans Hypothetical
protein F49C5.1 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -3
Query: 590 LTFLSGIST-SKRCSFLYICTRDPLSSIIMCVLYILFEXXXXXX*TPP 450
L F++ +S +K FL IC + S ++C+ Y++F PP
Sbjct: 44 LIFITTLSRLTKHDGFLKICCFNSFGSSVVCIGYLVFPVPTLLLENPP 91
>Z81124-9|CAB03379.2| 328|Caenorhabditis elegans Hypothetical
protein T21B4.12 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -3
Query: 563 SKRCSFLYICTRDPLSSIIMCVLYILFEXXXXXX*TPP 450
+KR FL IC + S I+C+ Y+ F PP
Sbjct: 49 TKRDGFLKICCFNSFGSCIVCIGYLAFPVPSLLLEDPP 86
>Z81544-4|CAB04431.2| 329|Caenorhabditis elegans Hypothetical
protein F49C5.2 protein.
Length = 329
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 584 FLSGISTSKRCSFLYICTRDPLSSIIMCVLYILF 483
F + + SKR FL IC + S I+C+ Y+ F
Sbjct: 44 FATLLRISKRDGFLKICCFNSFGSSIVCIGYLAF 77
>Z49907-4|CAA90086.1| 454|Caenorhabditis elegans Hypothetical
protein B0491.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = -3
Query: 734 MSALIILRDVLSSGKRIS*HIAIPIFPTGVSTGATIWSPAFEKSLSFNLTFLSGISTSKR 555
+ +L +++ + + K++S +FP ++T + SP F + L +
Sbjct: 251 LKSLQVMQVCVRAEKQMSTVRVALLFPVTLATYVMLASPLFGDLRTQIYVKLFSLHIQTL 310
Query: 554 CSFLYICTRDPLSSI--IMCVLYILFE 480
C FLY+CT PL+ + +YI +E
Sbjct: 311 C-FLYLCTITPLNGFLGVRPRIYIFYE 336
>AF078785-6|AAC27094.1| 337|Caenorhabditis elegans Serpentine
receptor, class x protein121 protein.
Length = 337
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -3
Query: 590 LTFLSGI-STSKRCSFLYICTRDPLSSIIMCVLYILF 483
L F+S + SKR FL IC + S I+C+ Y+ F
Sbjct: 41 LIFISTLLRISKRDGFLKICCFNSFGSSIVCIGYLAF 77
>AF024503-15|AAG24087.2| 289|Caenorhabditis elegans Serpentine
receptor, class x protein22 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/58 (22%), Positives = 27/58 (46%)
Frame = -3
Query: 566 TSKRCSFLYICTRDPLSSIIMCVLYILFEXXXXXX*TPPIDNQTPYFSANSLYFPTIS 393
TS SF I + +++MC++++L+ + P+ + YF ++ IS
Sbjct: 33 TSMNSSFGIITKNQSVCNMLMCLIFMLYVGPIQLSNSTPLSEYSKYFGLAAMIVYEIS 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,440,910
Number of Sequences: 27780
Number of extensions: 416522
Number of successful extensions: 1188
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1183
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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