Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_I23
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_03_0161 + 13337265-13337297,13337880-13338017,13338211-133383...    63   2e-10
06_03_0119 - 16849657-16849742,16850321-16850426                       30   1.7  
07_01_0236 - 1725061-1727070                                           30   2.2  
06_01_0272 + 2016836-2017963                                           29   5.1  
05_06_0166 + 26093618-26095381,26095820-26096039,26096345-260966...    29   5.1  
09_02_0456 - 9525067-9525422,9525679-9528226                           28   8.9  

>01_03_0161 +
           13337265-13337297,13337880-13338017,13338211-13338308,
           13338395-13338450,13338664-13338781,13338889-13338916,
           13339021-13339112,13339321-13339477,13339569-13339693,
           13339785-13339884,13339991-13340059
          Length = 337

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 9/212 (4%)
 Frame = +3

Query: 114 VINKFEASLVKFDVAFPYGDKHDA--FVALAKDSKDVDELLIAEVGVKDYGEKDNEVLAK 287
           V+++ +  LV+F   +    KH A  +  LA   K  D ++IA +    +  KD   LA+
Sbjct: 133 VLDENKDILVEFYAPWCGHCKHLAPIYEKLASVYKLDDGVVIANLDADKH--KD---LAE 187

Query: 288 KYGATKDNFPVVRLFLKGKNDPIPFDDSQGFTTDELRRFV-------RENTGLYLSLPGC 446
           KYG +   +P ++ F KG      +D   G   D+  +F+       R+  G   S  G 
Sbjct: 188 KYGVS--GYPTLKFFPKGNKAGEDYDG--GRELDDFVKFINEKCGTSRDTKGQLTSEAGR 243

Query: 447 VRSLDKLAIKFMKAKGENRKKVLKETEELQXXXXXXXXXXXXIYKTIMEKIIEKGDQFIN 626
           + SLD LA +F+ A  + RK++L   EE              +Y  I +KI++KG  +  
Sbjct: 244 IASLDALAKEFLGAANDKRKEILSNMEEEVVKLSGSAAKHGKVYIAIAKKILDKGHDYTK 303

Query: 627 TEHXRVXKILXGKVSDXXXXXIGIRINILQTF 722
            E  R+ ++L   +S        I+ N+L TF
Sbjct: 304 KETERLERMLEKSISPSKADEFIIKKNVLSTF 335


>06_03_0119 - 16849657-16849742,16850321-16850426
          Length = 63

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/48 (27%), Positives = 28/48 (58%)
 Frame = -2

Query: 293 VLLCQYLVIFFTVILHADFSYQKFIHVFRVLRECNKSIVFISVWKCNV 150
           ++L Q +++F+TVIL   FS  +    F   R+ + +++ I +W+  +
Sbjct: 10  LVLMQIIMVFYTVILSCSFSDARTFPEFFTQRDKDLTMLSIVLWQATI 57


>07_01_0236 - 1725061-1727070
          Length = 669

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -3

Query: 184 ASCLSPYGNATSNFTREASNLFITLLNEISSNXTEPVDVXAREADSTAKNTXRD 23
           A  L+ + + T NF+R  SN F+ LLN+  +N      + A E D+   N  +D
Sbjct: 106 AQGLTFFVSPTKNFSRAFSNQFLGLLNK-KNNGNTSNHIFAVELDTVLNNDMQD 158


>06_01_0272 + 2016836-2017963
          Length = 375

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 171 DKHDAFVALAKDSKDVDELLIAEVGVKDYGEKDNEVLAKKY 293
           DK   +V   ++S  V+E L A  G      KD+ V+ KKY
Sbjct: 274 DKPGDYVVATEESHTVEEFLQAAFGYAGLNWKDHVVIDKKY 314


>05_06_0166 +
           26093618-26095381,26095820-26096039,26096345-26096674,
           26097481-26098029,26098366-26098426,26099737-26099824,
           26100240-26100299
          Length = 1023

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 591 EKIIEKGDQFINTEHXRVXKILXGKVS 671
           E I+ +G + +N EH R   I+ GKVS
Sbjct: 913 ENIVLQGREVVNNEHGRQNSIVRGKVS 939


>09_02_0456 - 9525067-9525422,9525679-9528226
          Length = 967

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 387  DELRRFVRENTGLYLSLPGCVRSLDKLAIKFM-KAKGENRKKVLKETEEL 533
            DE+ R +R       +LP    S+ +L +KF+   KGEN+ K +K TE L
Sbjct: 916  DEMCRVLRIALLCVKNLPNNRPSM-RLVVKFLLDIKGENKPKAMKITEAL 964


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,113,535
Number of Sequences: 37544
Number of extensions: 232182
Number of successful extensions: 571
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 571
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)