Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_I14
(761 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical ... 145 3e-35
Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical pr... 144 8e-35
Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical pr... 143 1e-34
U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine rec... 29 3.6
U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical pr... 28 8.3
>AL031621-5|CAA20930.1| 437|Caenorhabditis elegans Hypothetical
protein F28H6.3 protein.
Length = 437
Score = 145 bits (351), Expect = 3e-35
Identities = 77/143 (53%), Positives = 95/143 (66%), Gaps = 1/143 (0%)
Frame = +3
Query: 282 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATSENPL-LHQYT 458
E G ++S+WVE+ +LA E K AV+LGQGFPD APK VTE L IA+ + HQYT
Sbjct: 11 ENVGEHQESIWVEFGKLAIENK-AVSLGQGFPDSPAPKFVTEILKDIASHPEKIESHQYT 69
Query: 459 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 638
R FG P LV LSK+YS G ++A ++IL+T GAY ALY + LG + GDEVIIIEP
Sbjct: 70 RAFGHPDLVGILSKIYSYFYGVNVNATDDILITVGAYNALYYSFLGWISKGDEVIIIEPA 129
Query: 639 FDCYDFMVKCAGGVPRFIALKPK 707
FDCY VK AGG P + +K K
Sbjct: 130 FDCYFPQVKFAGGTPISVVMKLK 152
>Z69793-5|CAA93673.2| 441|Caenorhabditis elegans Hypothetical
protein R03A10.4a protein.
Length = 441
Score = 144 bits (348), Expect = 8e-35
Identities = 79/149 (53%), Positives = 95/149 (63%), Gaps = 2/149 (1%)
Frame = +3
Query: 243 SVCRTMAEKFRLP-ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQ 419
S CR + P ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L
Sbjct: 14 SRCRMSSSFAPKPAERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLEN 72
Query: 420 IATS-ENPLLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILG 596
++ E HQYTRG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG
Sbjct: 73 LSKHPELTAAHQYTRGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLG 132
Query: 597 HVDTGDEVIIIEPYFDCYDFMVKCAGGVP 683
V+ GDEV+IIEP +DCY VK AGGVP
Sbjct: 133 WVNKGDEVLIIEPAYDCYYPQVKFAGGVP 161
>Z69793-6|CAI46593.1| 424|Caenorhabditis elegans Hypothetical
protein R03A10.4b protein.
Length = 424
Score = 143 bits (347), Expect = 1e-34
Identities = 75/135 (55%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
Frame = +3
Query: 282 ERYGAGEKSVWVEYIQLAAEYKPAVNLGQGFPDYHAPKHVTEALSQIATS-ENPLLHQYT 458
ER S+WVE+ LAAE K AVNLGQGFPD APK VT+ L ++ E HQYT
Sbjct: 11 ERTAQHSASIWVEFTTLAAETK-AVNLGQGFPDSPAPKFVTDLLENLSKHPELTAAHQYT 69
Query: 459 RGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEVIIIEPY 638
RG+G P LV+ L+K+YS Q+D NE+LVT GAY +LY LG V+ GDEV+IIEP
Sbjct: 70 RGYGHPMLVDILAKMYSHFYNVQVDPMNEVLVTVGAYLSLYYAFLGWVNKGDEVLIIEPA 129
Query: 639 FDCYDFMVKCAGGVP 683
+DCY VK AGGVP
Sbjct: 130 YDCYYPQVKFAGGVP 144
>U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 22 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Frame = +3
Query: 117 ALSRFIYLLIFIMFRTSRRLFAAVNYSSLSRSVKLEHFIRQLSVCRTMAEKFRLPERYGA 296
A+ F +L +MFR + L + + SSLS LE ++ + + A L +
Sbjct: 197 AIQIFGRILFELMFRKNEELRSKLLTSSLSNRYSLEQNVKSMETLKVFA---NLQSIFLT 253
Query: 297 GEKSV--WVEYIQLAAE---YKPAVNLGQGFPDY 383
+ ++ ++ Y+ LA E Y + L G+P Y
Sbjct: 254 AQMTIFLFILYLGLAIEKTTYISLIELNAGYPIY 287
>U64600-1|AAK39203.1| 500|Caenorhabditis elegans Hypothetical
protein C33D12.2 protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/66 (34%), Positives = 30/66 (45%)
Frame = +3
Query: 441 LLHQYTRGFGLPRLVENLSKVYSPLIGRQIDAFNEILVTSGAYEALYSTILGHVDTGDEV 620
L + TR +LVE L +IG Q D F +L GA E LY + H T E
Sbjct: 287 LKEELTRSLERNKLVEMLKLSEKSIIGGQSDEFKMVL---GALE-LYDKTVAHAMTRYED 342
Query: 621 IIIEPY 638
I + P+
Sbjct: 343 IFMLPH 348
>Z82078-2|CAD54160.1| 714|Caenorhabditis elegans Hypothetical
protein W09D6.1b protein.
Length = 714
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 225 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 332
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
>Z82078-1|CAB04944.2| 707|Caenorhabditis elegans Hypothetical
protein W09D6.1a protein.
Length = 707
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 225 HF-IRQLSVCRTMAEKFRLPERYGAGEKSVWVEYIQL 332
HF I ++ CR+ K R+ YG E S W Y ++
Sbjct: 242 HFPISSINSCRSPENKTRVFNVYGVTEVSCWASYFEV 278
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,723,614
Number of Sequences: 27780
Number of extensions: 351452
Number of successful extensions: 654
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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