Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_I08
(724 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F12.07 |||phosphoserine aminotransferase |Schizosaccharomyc... 109 5e-25
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 28 1.2
SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 3.6
SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|ch... 27 3.6
SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces ... 27 3.6
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 26 6.3
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 25 8.3
SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr 2|||... 25 8.3
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 25 8.3
>SPAC1F12.07 |||phosphoserine aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 109 bits (261), Expect = 5e-25
Identities = 68/222 (30%), Positives = 108/222 (48%), Gaps = 17/222 (7%)
Frame = +1
Query: 109 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 288
+V NF AGPA + V E + NF+ G+ + E SHRS + + R L +
Sbjct: 6 EVVNFAAGPAAMITSVVEEFGKDFVNFQGLGMGVAEISHRSKQGSGIVTSAESNFRKLYN 65
Query: 289 VPDNYKVXXXXXXXXXXXXXVPLNLI---------SRTGTADYVVTGAWSXXXXXXXXXY 441
+P+N+ + N+ +++ A+Y++TGAWS
Sbjct: 66 IPENFHILFMQGGGTEQFAACLYNVYAHHALKNGNAKSLVANYIITGAWSKKAYAEAERL 125
Query: 442 G-KVNLVLPPTD---KYEDIPD--QTKWNLDPNASYVHICTNETIHGVEFDFIPDT--KG 597
G ++ + + KY +P+ K+ D S V+ C NET+HGVEF+ P KG
Sbjct: 126 GFPCHVAVDMKELAGKYGSLPEDKDLKFTPDGETSLVYYCDNETVHGVEFNEPPTNIPKG 185
Query: 598 VPLIADMSSNIMSXKVDVSKFGVIYAGAQKNIGTSGVXLVIV 723
+ D+SSN +S K+D +K +I+AGAQKN G +G+ +V V
Sbjct: 186 AIRVCDVSSNFISRKIDFTKHDIIFAGAQKNAGPAGITVVFV 227
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 520 WDQGSILSDQVCLHIYLSVVAPNLLSHIFSPPW 422
WD+ +L+++ L I L +AP +FSPPW
Sbjct: 275 WDRAELLANK--LGISLPKMAPLDFGDLFSPPW 305
>SPCC1494.07 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1502
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +1
Query: 169 KNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLL 285
+N+ + +SLL S S++Y L + D+V N+L
Sbjct: 1197 RNQWSQVRALALSLLSDSLNSTSYRLLGISCSDMVSNIL 1235
>SPCC4B3.03c |||DUF21 domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 679
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +1
Query: 169 KNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPDNY 303
+++ T ++ SG+ L T HR KLN + ++ +LD+ + +
Sbjct: 211 ESQSTMYKKSGLKTLVTLHRDLGIDKLNQDEVTIITAVLDLREKH 255
>SPCC285.14 |||TRAPP complex subunit Trs130 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1150
Score = 26.6 bits (56), Expect = 3.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 148 EEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVV 273
E V + N + + + ++LL T H S T KLNV D++
Sbjct: 604 ESVDSVTCNYVLSSSKNPMNLLFTLHNSITDGKLNVHCNDII 645
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.8 bits (54), Expect = 6.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 364 LSLKEQLQIDQDPHQLKTALCSCPVHLISFAQ 269
L+LK+ + I + H L A+CS ISF Q
Sbjct: 352 LTLKDNICIIDEAHNLIDAICSMHSSSISFRQ 383
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 25.4 bits (53), Expect = 8.3
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +1
Query: 166 IKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPDNYKV 309
+ EL E S LLE + R S + ++ +++L DVP K+
Sbjct: 2671 VLTELAKHEGSSELLLECAWRISDWSNNRESLEVAIKSLSDVPTPRKL 2718
>SPBC25D12.06 |||RNA helicase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 565
Score = 25.4 bits (53), Expect = 8.3
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Frame = -1
Query: 379 YQFWILSLKEQLQIDQDPHQLKTALCSCPVHLISFAQHP------EFRHLASCMLKNDDL 218
YQFWI L + ++ + L P L SF P F +L C+ KN +
Sbjct: 168 YQFWIERLLHGITEKEELQHIYKILTLTPASLDSFQNRPPYIGITTFPNLQHCIKKNQPI 227
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 624 KHYVEXS*CFKVWGDICWCSKEYWY 698
+H V F+++ + WC +YWY
Sbjct: 195 EHAVAPFFVFQIFCCVLWCLDDYWY 219
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,898,787
Number of Sequences: 5004
Number of extensions: 60062
Number of successful extensions: 201
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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