Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_I07
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    24   1.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.8  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   6.6  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   8.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.7  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 446 GAELVDAVLDVVRKECENCDCLQ 514
           G ++  A+ +++ K CE CD  Q
Sbjct: 49  GNQIKGALPEIIGKNCERCDSRQ 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +2

Query: 392 VFGQSGAGNNW-AKGHYTEGAELVDAVLDVVRKECENCDCLQG 517
           +  + G  N + A+  Y  G+E   +++ +   +C  C C  G
Sbjct: 839 ILAEGGCPNLYDARKPYVNGSEYHPSIVSLGEYKCVTCKCENG 881


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = +2

Query: 221 SDLQLERISVYYNEASVATAESGG-------KYVPRAILLDLEP 331
           S L+ +++S YYNE+ V  +  G        KY P   ++D  P
Sbjct: 119 STLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 7/44 (15%)
 Frame = +2

Query: 221 SDLQLERISVYYNEASVATAESGG-------KYVPRAILLDLEP 331
           S L+ +++S YYNE+ V  +  G        KY P   ++D  P
Sbjct: 119 STLRRQQMSSYYNESRVMMSPPGNVLNLTMPKYEPNPSIIDPGP 162


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +2

Query: 428 KGHYT-EGAELVDAVLDVVRKECENC 502
           KG  T +GAEL   + D +  EC  C
Sbjct: 53  KGKCTPDGAELKRHLPDALHTECSKC 78


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 625 SSPLAQSIRHCRRTIQRSSLHPS 693
           SSP  + I    R+ + +SLHPS
Sbjct: 154 SSPFDKLIEEDSRSNEDTSLHPS 176


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 625 SSPLAQSIRHCRRTIQRSSLHPS 693
           SSP  + I    R+ + +SLHPS
Sbjct: 102 SSPFDKLIEEDSRSNEDTSLHPS 124


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 625 SSPLAQSIRHCRRTIQRSSLHPS 693
           SSP  + I    R+ + +SLHPS
Sbjct: 285 SSPFDKLIEEDSRSNEDTSLHPS 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,031
Number of Sequences: 336
Number of extensions: 2804
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)