Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_I06
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 73 5e-14
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 71 2e-13
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 67 2e-12
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 64 3e-11
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 58 1e-09
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 29 0.56
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 29 0.98
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 3.0
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 3.9
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 26 5.2
SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|c... 26 5.2
SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr 1|... 26 6.9
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 26 6.9
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 25 9.1
SPBC646.12c |gap1|src1, sar1|GTPase activating protein Gap1|Schi... 25 9.1
SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|c... 25 9.1
SPBC27.02c |ask1|mug181|DASH complex subunit Ask1|Schizosaccharo... 25 9.1
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 72.9 bits (171), Expect = 5e-14
Identities = 49/146 (33%), Positives = 84/146 (57%)
Frame = +1
Query: 73 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 252
L+ LD+S N+L L LS L HL++L +DSN L +L + + +L L L+ NN ++ L
Sbjct: 670 LQYLDISYNQLEDLTG-LSSLIHLRELKVDSNHLWSL-DGIQHLDGLLKLSACNNRIKEL 727
Query: 253 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNL 432
NL+ L+++ NN+++ ++I LQ+L VL L +NK+T + +++ L +
Sbjct: 728 SFTNSNLHRLEELLLGNNEIEEI-EEISSLQNLMVLQLDNNKLTNLKASQPMIHLRILRI 786
Query: 433 SQNEISLIGEDLHQAPRLKILRLDEN 510
S N I + ++ Q P L+ L +D N
Sbjct: 787 SNNAIHQL--EVDQFPHLRTLYMDLN 810
Score = 43.6 bits (98), Expect = 3e-05
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 3/131 (2%)
Frame = +1
Query: 7 VLQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 186
+L+I++ + ++ +D F LR L + N+ + P D+ +LK L + + +A
Sbjct: 783 ILRISNNAIHQLEVDQFPH---LRTLYMDLNRFN-RPPDIRRLKRLVNFSFRTQDPEA-- 836
Query: 187 ESLINLKKLEVLNI--SNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQIL-GLQSLDV 357
+ + L++ N+ SNN TL C ++ + +N +L+ PK I + +L V
Sbjct: 837 SNFVIQPSLDIRNLYLSNNTFVTLD-CKHMFLGVRYLELANVQLKEVPKYIATSMPNLRV 895
Query: 358 LDLSHNKITEI 390
LDLSHN I++I
Sbjct: 896 LDLSHNYISDI 906
Score = 42.3 bits (95), Expect = 7e-05
Identities = 29/79 (36%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +1
Query: 10 LQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQA 180
L++A+ +LKE+P + + LR LDLS N +S + + L L+ + +L L N K++
Sbjct: 872 LELANVQLKEVPKYIATSMPNLRVLDLSHNYISDI-ESLKPLQMIHRLYLVGNRIKKMRN 930
Query: 181 LPESLINLKKLEVLNISNN 237
L + L NLK+L VL++ N
Sbjct: 931 LCDILANLKQLNVLDLRMN 949
Score = 31.1 bits (67), Expect = 0.18
Identities = 24/104 (23%), Positives = 47/104 (45%)
Frame = +1
Query: 136 KHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQ 315
K + QL++ L +L +E L + N + L C + +L V + L
Sbjct: 603 KRIIQLDISRRHLDSLIGLSELCPSIEELTLEGNEIAYLTGCPVTIRDLNAVENRLSSLT 662
Query: 316 AFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIELNLSQNEI 447
+F L +L LD+S+N++ ++ S +++ EL + N +
Sbjct: 663 SFSN----LLNLQYLDISYNQLEDLTGLSSLIHLRELKVDSNHL 702
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 70.9 bits (166), Expect = 2e-13
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +1
Query: 10 LQIADCKLKEIPIDVFS-LCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 186
L ++ L+E+P + + + L L N + + ++ K L+ LN+ SN L+ P
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFP 91
Query: 187 ESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 366
ESL L+ LE+L+IS N ++ LP L NLK + S N+L P I + +L++L +
Sbjct: 92 ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKI 151
Query: 367 SHNKITEIP 393
+N I P
Sbjct: 152 ENNHIVFPP 160
Score = 57.6 bits (133), Expect = 2e-09
Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Frame = +1
Query: 82 LDLSKNKLSVLP-DDLSKLK-HLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTLP 255
LDLS L LP + L +++ + +L L N ++++ ++ +L LNI +N ++ P
Sbjct: 32 LDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSNVLREFP 91
Query: 256 VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNL 432
L L +L+ + S NK++ P+ L +L VL +S N++ E+P ++ + +E L +
Sbjct: 92 ESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPTYIAHMPNLEILKI 151
Query: 433 SQNEI 447
N I
Sbjct: 152 ENNHI 156
Score = 56.0 bits (129), Expect = 6e-09
Identities = 33/98 (33%), Positives = 54/98 (55%)
Frame = +1
Query: 73 LRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 252
LR L++ N L P+ L +L+ L+ L++ NK++ LPES L L+VL+IS N + L
Sbjct: 77 LRYLNIRSNVLREFPESLCRLESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFEL 136
Query: 253 PVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 366
P + ++ NL+ + NN + FP + L D+
Sbjct: 137 PTYIAHMPNLEILKIENNHI-VFPPPHIANNDLQDSDM 173
Score = 35.9 bits (79), Expect = 0.006
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Frame = +1
Query: 337 GLQSLDVLDLSHNKITEIPYGMSELY---VIELNLSQNEISLIGEDLHQAPRLKILRLDE 507
G ++ LDLSH + E+PY E + L L N I IG ++ + RL+ L +
Sbjct: 25 GPENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRS 84
Query: 508 NCLSLDEIKPSLLRDSKIHTVSVDGN 585
N L E SL R + + + N
Sbjct: 85 NVLR--EFPESLCRLESLEILDISRN 108
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 67.3 bits (157), Expect = 2e-12
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 5/189 (2%)
Frame = +1
Query: 37 EIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSN---KLQALPESLINLK 207
++P+D C L+ LD+S N S ++ L+ L+ LN+ N +L L S ++
Sbjct: 443 DLPLDFMERCVKLKRLDISNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRN 502
Query: 208 KLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITE 387
L+ LNI+NN + LP + L NL + S N FP I L L+ L+ SHN +++
Sbjct: 503 SLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQ 562
Query: 388 IPYGMSELYVIE-LNLSQNEIS-LIGEDLHQAPRLKILRLDENCLSLDEIKPSLLRDSKI 561
I + L ++ L L N++S + +++ L+ + L N ++ I SL K+
Sbjct: 563 ISSKIGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAIT--NI-ASLSECPKL 619
Query: 562 HTVSVDGNL 588
++++V NL
Sbjct: 620 NSINVACNL 628
Score = 62.5 bits (145), Expect = 6e-11
Identities = 57/184 (30%), Positives = 87/184 (47%), Gaps = 29/184 (15%)
Frame = +1
Query: 55 FSLCDVLRNLDLSKNKLSVLP-------------------------DDLSKLKHLKQLNL 159
FS + NLD+S++ L V+P D + + LK+L++
Sbjct: 401 FSEKKITANLDISRSNLEVIPVKIYPYAHELISLNVSHNLSLDLPLDFMERCVKLKRLDI 460
Query: 160 DSNKLQALPESLINLKKLEVLNISNNFVQTL-PVCLKNL--NNLKQVYASNNKLQAFPKQ 330
+N + + L++LEVLN+S N + L P+ L N+LK++ +NNKL P
Sbjct: 461 SNNLRSPRGKPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHS 520
Query: 331 ILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLSQNEISLIGEDLHQAPRLKILRLDE 507
L +L LDLS+N P ++EL +E LN S N +S I + +LK L L
Sbjct: 521 TRYLVNLTYLDLSYNNFVTFPLIITELSQLETLNFSHNLLSQISSKIGSLVKLKHLYLQF 580
Query: 508 NCLS 519
N LS
Sbjct: 581 NDLS 584
Score = 50.0 bits (114), Expect = 4e-07
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Frame = +1
Query: 49 DVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNI 228
D S L+ L + ++S + +L KLKHL L+L +N ++ PE + + L+V+N+
Sbjct: 700 DAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNL 759
Query: 229 SNNFVQ--TLPVC-----LKNLNNLKQVYA-SNNKLQAFPKQILGLQSLDVLDLSHNKIT 384
S+N ++ LPV + ++ LK + S N + + Q + +++ L L N++
Sbjct: 760 SSNILEKIKLPVATSKKLTRTISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLG 819
Query: 385 EIPYGMSELY--VIELNLSQNEISLIGEDLHQ 474
+ E + + LNLS N ++ I Q
Sbjct: 820 NDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQ 851
Score = 46.4 bits (105), Expect = 5e-06
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 1/96 (1%)
Frame = +1
Query: 124 LSKLKHLKQLNLDSNKLQALPESLI-NLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYAS 300
L K LK LNL N L +P N L+ L +S N + L + L+ +YA+
Sbjct: 826 LEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSGNELANLSISSTAQVLLETLYAN 885
Query: 301 NNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSE 408
N+L +FPK +SL LD+S N + + +E
Sbjct: 886 GNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKAE 921
Score = 33.1 bits (72), Expect = 0.045
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Frame = +1
Query: 82 LDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLIN-LKKLEVLNISNNFVQTLPV 258
+D S L+ + D +L ++ KL L +S+I L +E + ++ N ++
Sbjct: 642 IDFSFCPLTTI-DPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISD 700
Query: 259 CLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVIE-LNLS 435
+ + NLK + +N ++ + L+ L LDL N I P + ++ ++ +NLS
Sbjct: 701 AISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLS 760
Query: 436 QNEISLI 456
N + I
Sbjct: 761 SNILEKI 767
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 63.7 bits (148), Expect = 3e-11
Identities = 51/167 (30%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Frame = +1
Query: 67 DVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQ 246
D L NL+L NK+ V+ ++L L +L++L + NK+ E+ L+KL +L+I +N +
Sbjct: 148 DRLTNLELGGNKIRVI-ENLDTLVNLEKLWVGKNKITKF-ENFEKLQKLSLLSIQSNRIT 205
Query: 247 TLP--VCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDLSHNKITEIPYGMSELYVI 420
CL + L+++Y S+N L +F I L++L++LD+S+N I + Y ++
Sbjct: 206 QFENLACLSHC--LRELYVSHNGLTSF-SGIEVLENLEILDVSNNMIKHLSYLAGLKNLV 262
Query: 421 ELNLSQNEISL---IGEDLHQAPRLKILRLDENCLSLDEIKPSLLRD 552
EL S NE+S I ++L +L+ + + N L + P++ R+
Sbjct: 263 ELWASNNELSSFQEIEDELSGLKKLETVYFEGN--PLQKTNPAVYRN 307
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 58.0 bits (134), Expect = 1e-09
Identities = 42/129 (32%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +1
Query: 10 LQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALPE 189
L+ + CKLK IP +VF L +LDLS N+L+ +P L +L L LNL SNK+
Sbjct: 337 LRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKITGCRT 396
Query: 190 SL-INLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFP--KQILGLQSLDVL 360
I+L L++L +S N + +L L+N+ +L+++ +N + ++++G + +
Sbjct: 397 FYHISLSHLQILVLSRNHLTSLS-GLENVPSLEKLDIRDNSITDVVEFRRLVGNTNFEEA 455
Query: 361 DLSHNKITE 387
LS N T+
Sbjct: 456 YLSLNPFTK 464
Score = 52.0 bits (119), Expect = 9e-08
Identities = 44/109 (40%), Positives = 62/109 (56%), Gaps = 10/109 (9%)
Frame = +1
Query: 274 NNLKQVYASNNKLQAFPKQI-LGLQSLDVLDLSHNKITEIPYGMSEL-YVIELNLSQNEI 447
+ L + S+ KL++ PK + L LQSL LDLS N++TEIPY + EL + LNL+ N+I
Sbjct: 332 SQLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
Query: 448 SLIGEDLH-QAPRLKILRLDENCL-SLDEIK--PSL----LRDSKIHTV 570
+ H L+IL L N L SL ++ PSL +RD+ I V
Sbjct: 392 TGCRTFYHISLSHLQILVLSRNHLTSLSGLENVPSLEKLDIRDNSITDV 440
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 29.5 bits (63), Expect = 0.56
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 178 ALPESLINLKKLEVLNISNNFVQTLPV 258
AL ESL +LKK E LN+S LP+
Sbjct: 38 ALTESLKDLKKFETLNVSGKVPHVLPL 64
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 28.7 bits (61), Expect = 0.98
Identities = 37/140 (26%), Positives = 69/140 (49%)
Frame = +1
Query: 7 VLQIADCKLKEIPIDVFSLCDVLRNLDLSKNKLSVLPDDLSKLKHLKQLNLDSNKLQALP 186
V QI + +LKE+P+ +S+ ++ +L N L + + + + L KLQ
Sbjct: 288 VKQILEKELKELPVACYSIINLHDSLTQFPN-LDFILKTTALVLFIIFLVPSFKKLQN-E 345
Query: 187 ESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLDVLDL 366
ES+++L L +L+ + F T+P + N+ K A +++Q +L + +VL++
Sbjct: 346 ESILHL--LNILH--SIFEYTVPEAIDNIVQSKTSDARTSEIQHL--SVLLQKVANVLNI 399
Query: 367 SHNKITEIPYGMSELYVIEL 426
EIP +SE VI +
Sbjct: 400 LSKVAHEIP--LSEAVVIRI 417
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 1.3
Identities = 22/62 (35%), Positives = 27/62 (43%)
Frame = -3
Query: 278 LFKFFKQTGSVCTKLFDIFKTSSFFKFMSDSGKA*SLLLSKFNCFRCFNLLKSSGKTESL 99
LF TG C I+ T + F + +A + LL RCF LL SG T L
Sbjct: 545 LFIIAGNTGFPCFFRTFIWTTYKLYPFSFEKKEAMAFLLDHPR--RCFTLLFPSGATWVL 602
Query: 98 FF 93
FF
Sbjct: 603 FF 604
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 3.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 217 VLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPK 327
V SNN Q +P+ LK+ N+ +YAS N FP+
Sbjct: 101 VFGTSNNH-QIVPLTLKDGNDFGALYASLNTTPHFPQ 136
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 235 NFVQTLPVCLKNLNNLKQVYASNNKLQA 318
N ++ P+ LKN NNL + AS+N L +
Sbjct: 788 NALRQAPIGLKNTNNLSERNASSNLLNS 815
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -1
Query: 352 LSSVIQVFVSEKPVIYYCLHKPVLNYLNSSNKLGV 248
L + + FVS ++ C PV+ Y+ N +G+
Sbjct: 289 LQNYVGFFVSVLDALFECFDVPVVQYMYQENIIGI 323
>SPBC543.04 |||UPF0171 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 585
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -1
Query: 307 YYCLHKPVLNYLNSSNKLGVFVQSCLIYLK 218
+ + KP L + + +N+LG+ V C I K
Sbjct: 346 FIAIVKPNLTFTDIANRLGISVSECFILAK 375
>SPAC1071.02 |||TFIIH regulator |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1018
Score = 25.8 bits (54), Expect = 6.9
Identities = 31/131 (23%), Positives = 59/131 (45%)
Frame = +1
Query: 175 QALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVYASNNKLQAFPKQILGLQSLD 354
+ +P + L L + N+ ++ V+ L + +K+ L + + KL + ++ S
Sbjct: 808 EGIPLAFKLLDTLNLQNVGDSSVKALSIIIKDDPALSKENSYVEKL-LYKQRFYASVSPK 866
Query: 355 VLDLSHNKITEIPYGMSELYVIELNLSQNEISLIGEDLHQAPRLKILRLDENCLSLDEIK 534
+L+ I+ G LY++ L+ N I + +++ IL L CLSL +I
Sbjct: 867 ILE----HISTATGGEKSLYLMLLS---NVIGNVPKEIVIPDMPSILPLLLQCLSLSDIS 919
Query: 535 PSLLRDSKIHT 567
L + IHT
Sbjct: 920 VKLSTLNVIHT 930
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 25.8 bits (54), Expect = 6.9
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 499 LDENCLSLDEIKPSLLRDSKIHTVSVDGNLFEPKQLASLEGYNEYSE 639
LD+ +S+ E P LR S + + + L K SLEGYN+ SE
Sbjct: 790 LDKGKVSIKESGP--LRASVVVDIPIS-ELSHMKATISLEGYNDCSE 833
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 133 LKHLKQLNLDSNKLQALPESLINLKKLEVLNISNNFVQTL 252
L+ L++ NLD+NK Q SL+++KK L S +L
Sbjct: 2576 LRQLQKFNLDANKFQF--TSLLDIKKWLNLGPSEKLFSSL 2613
>SPBC646.12c |gap1|src1, sar1|GTPase activating protein
Gap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 766
Score = 25.4 bits (53), Expect = 9.1
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +1
Query: 166 NKLQALPESLINLKKLEVLNISNNFVQTLPVCLKNLNNLKQVY---ASNNKLQAFPKQIL 336
N + P+ +++ L V N Q P NL ++V A N +Q Q+L
Sbjct: 226 NDVAIHPDLQLDIHPLSVYRYLVNTGQLSPSEDDNLLTNEEVSEFPAVKNAIQERSAQLL 285
Query: 337 GLQSLDVLDLSHNKITEIPYGMSELYVIELNLS 435
L + LD N I EIPYG+ + + NL+
Sbjct: 286 -LLTKRFLDAVLNSIDEIPYGIRWVCKLIRNLT 317
>SPAP27G11.09c |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 326
Score = 25.4 bits (53), Expect = 9.1
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = -1
Query: 550 LEANLV*FHPNSNSSHPIAISLILELG 470
++ANL+ HP S+ +A +++++LG
Sbjct: 232 VQANLLLQHPADGRSYAVATAMLMDLG 258
>SPBC27.02c |ask1|mug181|DASH complex subunit
Ask1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +1
Query: 280 LKQVYASNNKLQAFPKQILGLQSLDVLDLSHNK-ITEIPYGMS-ELYVIELNLSQNEISL 453
L +V +N ++Q P++ LQS +V+D+ + ++ P M ++ + S + +SL
Sbjct: 180 LHRVLDTNWQVQVTPREPKNLQSQEVMDIDSSPFVSPSPISMKMDMPSLNDRNSSHALSL 239
Query: 454 IGEDLHQA 477
E H++
Sbjct: 240 FAEFEHES 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,068,921
Number of Sequences: 5004
Number of extensions: 63304
Number of successful extensions: 233
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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