Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_I04
         (762 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    24   1.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   2.3  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   7.1  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   9.4  

>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 492 IMNSYLRPSSP*KTNSLRREKRSINTLRN 578
           I N + RPS     N  +R   S+N+LRN
Sbjct: 22  IQNVHTRPSKEPICNICKRVYSSLNSLRN 50


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +2

Query: 509 KAIQSLEDQLTQKGEEINKYIEEHDIRIQRADRTMPEPPPEQSTSTKSN 655
           K  Q+ E+ +    EE   Y E   IRI         PP ++   T S+
Sbjct: 158 KKEQNAEEDIVDPVEENETYDEFDTIRIPIVRSLSKSPPNDEGIETDSD 206


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 266 VGKKTNEEIFAGFQTLR 316
           VG  T+EE+  G QTL+
Sbjct: 14  VGAMTHEELKTGIQTLQ 30


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 609 VRSARWMRISCSSMY 565
           V +  WM +SCSS +
Sbjct: 409 VNAGMWMWLSCSSFF 423


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,651
Number of Sequences: 438
Number of extensions: 4523
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)