Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H23
         (867 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    41   4e-05
AY748846-1|AAV28192.1|  147|Anopheles gambiae cytochrome P450 pr...    24   5.2  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   5.2  
AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical prote...    24   5.2  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    23   9.1  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 41.1 bits (92), Expect = 4e-05
 Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
 Frame = +1

Query: 175 IEEMLQFMWPGCSVKPFXXXXXXXXXXXXDVDCYAQLPEGEIPSSRTVIQARNRLRQFPH 354
           IE+++Q +WP   V+ F            D+D         +P     ++  ++    P+
Sbjct: 299 IEKIVQNLWPSARVEMFGSFRTGLYLPTSDIDLVVIGQWTMLPLRTLEMELISQGIAEPN 358

Query: 355 IFTELFAITTAKVPVLKCYHIPTGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVII 534
               +  +  A VP++K     T    DI+F   SG+ ++KL+       P   KL +++
Sbjct: 359 ---SVRVLDKASVPIVKLTDRQTQVKVDISFNMESGVQSAKLIKGFKREYPVLEKLVLVL 415

Query: 535 KYWSKIKKITG--TNLMPNYGLTLLVIFYLQQ 624
           K +   + +    T  + +Y L L+ I +LQQ
Sbjct: 416 KQFLLQRDLNEVFTGGISSYSLILMCISFLQQ 447


>AY748846-1|AAV28192.1|  147|Anopheles gambiae cytochrome P450
           protein.
          Length = 147

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 328 RNRLRQFPHIFTELFAITTAKVPVLKCYHIPTG 426
           +  LR +P +    F  TT+K   L  YH+P G
Sbjct: 107 KETLRLYPSV--AFFGRTTSKDVTLGGYHVPAG 137


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 691 NTNFNNNYLHRTTNNESLYKLL 756
           N N NNN  H  T N  L KL+
Sbjct: 145 NNNNNNNNEHHNTYNARLSKLM 166


>AJ439398-1|CAD28124.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +1

Query: 691 NTNFNNNYLHRTTNNESLYKLL 756
           N N NNN  H  T N  L KL+
Sbjct: 145 NNNNNNNNEHHNTYNARLSKLM 166


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 682 DYWNTNFNNNYLHRTTNNESLYKLLGGFFSYYGTFDFXXNIIC 810
           D +  N  N++LH  T    L +L G     YG   F   + C
Sbjct: 101 DTFFANDKNSFLHDVTERNKLVRLAGDGAVTYG-MRFTTTLAC 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 827,790
Number of Sequences: 2352
Number of extensions: 16281
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)