Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_H23
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical pr... 77 2e-14
U80448-10|AAB37823.1| 482|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical pr... 61 1e-09
U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF039719-8|AAO12411.1| 338|Caenorhabditis elegans Mutator prote... 51 9e-07
AF039719-7|AAB96748.1| 441|Caenorhabditis elegans Mutator prote... 51 9e-07
AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory cy... 43 2e-04
AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in ... 43 2e-04
AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in ... 43 2e-04
AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in ... 43 2e-04
AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in ... 43 2e-04
Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical pr... 28 7.5
>U21322-3|AAA62541.1| 1425|Caenorhabditis elegans Hypothetical protein
K10D2.3 protein.
Length = 1425
Score = 77.0 bits (181), Expect = 2e-14
Identities = 63/202 (31%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Frame = +1
Query: 262 DVDCYAQLPEGEIP----SSRTVIQARNRLRQFPHIFTELFAITTAKVPVLKCY-HIPTG 426
D+D + +G++P +++ VIQ + + H+ + AI TAKVP++K + G
Sbjct: 1067 DIDICLRFGDGDVPPKDLTAKEVIQKTESVLRKCHLVKRVQAIVTAKVPIVKFQVKLSNG 1126
Query: 427 --YHCDINFTSLSGIYNSKLVA-YLLHL-DPRAVKLAVIIKYWSKIKKI--TGTNLMPNY 588
DI++ ++ IYN+ L+ Y L D R KLA+ +K W+K +I + +Y
Sbjct: 1127 AIIDVDISYYNILAIYNTALLKEYSLWTPDKRFAKLALFVKTWAKNCEIGDASRGSLSSY 1186
Query: 589 GLTLLVIFYLQQICMLPSVKDLQSDV-----ECLMTDYWNTNF---NNNYLHR-TTNNES 741
+++I YLQ C P + LQ D E + D W+T+F + L R N ES
Sbjct: 1187 CHVIMLISYLQN-CDPPVLPRLQEDFRSDNRERRLVDNWDTSFAQVETSLLQRWPKNKES 1245
Query: 742 LYKLLGGFFSYYGTFDFXXNII 807
+LL G+F YY FDF ++
Sbjct: 1246 CAQLLIGYFDYYSRFDFRNFVV 1267
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 463 IYNSKLVAYLLHLDPRAVKLAVIIKYWSKIKKITGTNL----MPNYGLTLLVIFYLQQIC 630
++ S+L+ ++L + +I+ W+ + N +P YG ++ I +LQQI
Sbjct: 452 LHFSELMKTYVNLREEVAQFLQLIRLWATKAGLDSKNKPRIGLPRYGFDIMAIHFLQQIG 511
Query: 631 MLPSVKDL 654
LP + +L
Sbjct: 512 CLPVLHEL 519
>U80448-10|AAB37823.1| 482|Caenorhabditis elegans Hypothetical
protein F59A3.9 protein.
Length = 482
Score = 62.5 bits (145), Expect = 4e-10
Identities = 53/206 (25%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Frame = +1
Query: 262 DVDCYAQLP--EGEIPSSRTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHC 435
D+D ++P EG P + ++Q R L + IF++ + + +PVL+ H T
Sbjct: 118 DIDFTVKVPTLEGANPFLK-LMQLRKELSCYYTIFSKAY-VQKGNIPVLQLMHAETKVSI 175
Query: 436 DINFTSLSGIYNSKLVAYLLHLDPRAVKLAVIIKYWSKIKKITGTNL--MPNYGLTLLVI 609
D+ + + N++L+A+ LD R L +K W+ + G + + ++ L L++I
Sbjct: 176 DVTIDNDTSKRNTQLLAFYSQLDTRFPLLCKAMKAWAASCGVEGASRGRLNSFSLCLMLI 235
Query: 610 FYLQQICMLPSVKD----LQSDVECLMTDYWNTNFNNNYLHR-----TTNNESLYKLLGG 762
YLQ + +L ++++ L D+ +Y + L + N SL L G
Sbjct: 236 HYLQTVQVLLNIQEIFPELNGDIVVEDDNYMKRDLKIEILEKGAFDFNQNTSSLAVLFIG 295
Query: 763 FFSYYGTFDFXXNIICPYLGFPIXKK 840
F YY F+F N I G + KK
Sbjct: 296 FMKYYSEFNFKWNWISIKHGNVLKKK 321
>Z92784-7|CAE54895.1| 808|Caenorhabditis elegans Hypothetical protein
F31C3.2b protein.
Length = 808
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPT--GYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVIIKYWSK 549
+ AKVP++K G DIN +++GIYNS L+ Y D R LA+++K+W+
Sbjct: 578 LVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAM 637
Query: 550 IKKITGT--NLMPNYGLTLLVIFYLQ---QICMLPSVKDL---QSDVECLMTDYWNTNFN 705
+ I + +Y LLV+ YLQ ++P+++ L + D + + +
Sbjct: 638 VTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKFDRKLPLNELLLFGDI 697
Query: 706 NNYLHRT-TNNESLYKLLGGFFSYYGTFDF 792
+ L + N SL +LL GFF YY FDF
Sbjct: 698 ADKLPTSPPNTWSLGELLIGFFQYYNEFDF 727
>Z92784-6|CAB07197.1| 805|Caenorhabditis elegans Hypothetical protein
F31C3.2a protein.
Length = 805
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPT--GYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVIIKYWSK 549
+ AKVP++K G DIN +++GIYNS L+ Y D R LA+++K+W+
Sbjct: 575 LVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAM 634
Query: 550 IKKITGT--NLMPNYGLTLLVIFYLQ---QICMLPSVKDL---QSDVECLMTDYWNTNFN 705
+ I + +Y LLV+ YLQ ++P+++ L + D + + +
Sbjct: 635 VTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKFDRKLPLNELLLFGDI 694
Query: 706 NNYLHRT-TNNESLYKLLGGFFSYYGTFDF 792
+ L + N SL +LL GFF YY FDF
Sbjct: 695 ADKLPTSPPNTWSLGELLIGFFQYYNEFDF 724
>Z81526-9|CAE54892.1| 808|Caenorhabditis elegans Hypothetical protein
F31C3.2b protein.
Length = 808
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPT--GYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVIIKYWSK 549
+ AKVP++K G DIN +++GIYNS L+ Y D R LA+++K+W+
Sbjct: 578 LVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAM 637
Query: 550 IKKITGT--NLMPNYGLTLLVIFYLQ---QICMLPSVKDL---QSDVECLMTDYWNTNFN 705
+ I + +Y LLV+ YLQ ++P+++ L + D + + +
Sbjct: 638 VTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKFDRKLPLNELLLFGDI 697
Query: 706 NNYLHRT-TNNESLYKLLGGFFSYYGTFDF 792
+ L + N SL +LL GFF YY FDF
Sbjct: 698 ADKLPTSPPNTWSLGELLIGFFQYYNEFDF 727
>Z81526-8|CAB04268.1| 805|Caenorhabditis elegans Hypothetical protein
F31C3.2a protein.
Length = 805
Score = 60.9 bits (141), Expect = 1e-09
Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPT--GYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVIIKYWSK 549
+ AKVP++K G DIN +++GIYNS L+ Y D R LA+++K+W+
Sbjct: 575 LVPAKVPIVKMILNGEFDGIEVDINVNNIAGIYNSHLIHYYSLTDARLPALALLVKHWAM 634
Query: 550 IKKITGT--NLMPNYGLTLLVIFYLQ---QICMLPSVKDL---QSDVECLMTDYWNTNFN 705
+ I + +Y LLV+ YLQ ++P+++ L + D + + +
Sbjct: 635 VTGINNAQDGFLNSYTTILLVVHYLQCGVTPAVIPNLQYLFPHKFDRKLPLNELLLFGDI 694
Query: 706 NNYLHRT-TNNESLYKLLGGFFSYYGTFDF 792
+ L + N SL +LL GFF YY FDF
Sbjct: 695 ADKLPTSPPNTWSLGELLIGFFQYYNEFDF 724
>U21322-4|AAA62540.2| 508|Caenorhabditis elegans Hypothetical
protein K10D2.2 protein.
Length = 508
Score = 53.2 bits (122), Expect = 2e-07
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 10/184 (5%)
Frame = +1
Query: 286 PEGEIPSSRTVIQARNRLRQFPHIFTELFAITTAKVPVLKCYHIPTGYHCDINFTSLSGI 465
P S R + L FP E + AKVP+++ DI++ + +
Sbjct: 197 PSWATNSDRVMRAVAKALVDFPKAVDERYV--NAKVPIVRFRSSDMDMEADISYKNDLAL 254
Query: 466 YNSKLVAYLLHLDP-RAVKLAVIIKYWSKIKKI--TGTNLMPNYGLTLLVIFYLQQICML 636
+N++L+ DP R L V +K W+K + + +Y +++I YLQQ+ +
Sbjct: 255 HNTQLLQQYCKWDPERLPTLGVWVKAWAKRSGVGDASKGSLSSYAWIVMLIHYLQQVEPI 314
Query: 637 PSVKDLQSDVECLMTDYWNTNFNNNY-----LHRTTN-NESLYKLLGGFFSYYGT-FDFX 795
P + LQ + + +N Y RT S+ L GF YY T FD+
Sbjct: 315 PVLPCLQEMNHQKSENVYVQGYNTYYWKFVDTARTRRCRASVVDLFVGFLDYYATYFDYS 374
Query: 796 XNII 807
N+I
Sbjct: 375 TNVI 378
>AF039719-8|AAO12411.1| 338|Caenorhabditis elegans Mutator protein
2, isoform b protein.
Length = 338
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPTGYHCDINFTS---LSGIYNSKLVAYLLHLDPRAVKLAVIIKYWS 546
+ A++ +LK + G CDI+ LS ++NS L+ +L H+D R L I+K W+
Sbjct: 170 LVQAQIQILKVMTVD-GIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQWA 228
Query: 547 KIKKITG--TNLMPNYGLTLLVIFYLQQICMLPSVKDLQSDVECLMTDYWNTNFNNNYLH 720
K+ +Y L LLVI +LQ P + +LQ + W+ + L+
Sbjct: 229 ASTKVKDPKDGGFNSYALVLLVIHFLQCGTFPPILPNLQEIFKKDNFIAWDDKVYPSILN 288
Query: 721 -----------RTTNNESLYKLLGGFFSYYGTFDFXXNII 807
NN L +L F YY F+F N I
Sbjct: 289 FGAPLPKPLPRIAPNNAPLARLFIEFLYYYSMFNFKENYI 328
>AF039719-7|AAB96748.1| 441|Caenorhabditis elegans Mutator protein
2, isoform a protein.
Length = 441
Score = 51.2 bits (117), Expect = 9e-07
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Frame = +1
Query: 376 ITTAKVPVLKCYHIPTGYHCDINFTS---LSGIYNSKLVAYLLHLDPRAVKLAVIIKYWS 546
+ A++ +LK + G CDI+ LS ++NS L+ +L H+D R L I+K W+
Sbjct: 170 LVQAQIQILKVMTVD-GIDCDISVVMDRFLSSMHNSFLIRHLAHIDGRFAPLCAIVKQWA 228
Query: 547 KIKKITG--TNLMPNYGLTLLVIFYLQQICMLPSVKDLQSDVECLMTDYWNTNFNNNYLH 720
K+ +Y L LLVI +LQ P + +LQ + W+ + L+
Sbjct: 229 ASTKVKDPKDGGFNSYALVLLVIHFLQCGTFPPILPNLQEIFKKDNFIAWDDKVYPSILN 288
Query: 721 -----------RTTNNESLYKLLGGFFSYYGTFDFXXNII 807
NN L +L F YY F+F N I
Sbjct: 289 FGAPLPKPLPRIAPNNAPLARLFIEFLYYYSMFNFKENYI 328
>AY125085-1|AAM94369.1| 1113|Caenorhabditis elegans regulatory
cytoplasmic polyA polymeraseprotein.
Length = 1113
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 358 FTELFAITTAKVPVLKC-YHIP-TGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVI 531
F E + AKVP+L+ + P D+N + I N+ L+ Y D R L +
Sbjct: 640 FVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSV 699
Query: 532 IKYWSKIKKITGTN--LMPNYGLTLLVIFYLQ 621
+K W+K K I N +Y L L+VI +LQ
Sbjct: 700 VKEWAKRKGINDANKSSFTSYSLVLMVIHFLQ 731
>AF024497-5|AAO21477.1| 871|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform b protein.
Length = 871
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 358 FTELFAITTAKVPVLKC-YHIP-TGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVI 531
F E + AKVP+L+ + P D+N + I N+ L+ Y D R L +
Sbjct: 398 FVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSV 457
Query: 532 IKYWSKIKKITGTN--LMPNYGLTLLVIFYLQ 621
+K W+K K I N +Y L L+VI +LQ
Sbjct: 458 VKEWAKRKGINDANKSSFTSYSLVLMVIHFLQ 489
>AF024497-4|AAO21479.1| 807|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform d protein.
Length = 807
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 358 FTELFAITTAKVPVLKC-YHIP-TGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVI 531
F E + AKVP+L+ + P D+N + I N+ L+ Y D R L +
Sbjct: 334 FVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSV 393
Query: 532 IKYWSKIKKITGTN--LMPNYGLTLLVIFYLQ 621
+K W+K K I N +Y L L+VI +LQ
Sbjct: 394 VKEWAKRKGINDANKSSFTSYSLVLMVIHFLQ 425
>AF024497-3|AAO21478.1| 1036|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform c protein.
Length = 1036
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 358 FTELFAITTAKVPVLKC-YHIP-TGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVI 531
F E + AKVP+L+ + P D+N + I N+ L+ Y D R L +
Sbjct: 563 FVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSV 622
Query: 532 IKYWSKIKKITGTN--LMPNYGLTLLVIFYLQ 621
+K W+K K I N +Y L L+VI +LQ
Sbjct: 623 VKEWAKRKGINDANKSSFTSYSLVLMVIHFLQ 654
>AF024497-2|AAB70342.2| 1113|Caenorhabditis elegans Defective in
germ line developmentprotein 2, isoform a protein.
Length = 1113
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 358 FTELFAITTAKVPVLKC-YHIP-TGYHCDINFTSLSGIYNSKLVAYLLHLDPRAVKLAVI 531
F E + AKVP+L+ + P D+N + I N+ L+ Y D R L +
Sbjct: 640 FVESQKLILAKVPILRINFAAPFDDITVDLNANNSVAIRNTHLLCYYSSYDWRVRPLVSV 699
Query: 532 IKYWSKIKKITGTN--LMPNYGLTLLVIFYLQ 621
+K W+K K I N +Y L L+VI +LQ
Sbjct: 700 VKEWAKRKGINDANKSSFTSYSLVLMVIHFLQ 731
>Z92796-5|CAB07233.1| 518|Caenorhabditis elegans Hypothetical
protein H25K10.6 protein.
Length = 518
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 586 YGLTLLVIFYLQ-QICMLPSVKDLQSDVECLMTDYWNTNFNNNYLHRTTNNESLYKL 753
Y L L+ I Y + +L S+++++ DVE TD+ N +F T+ + L K+
Sbjct: 231 YELKLVNISYSSLNLSILSSIRNVRGDVEIAATDFENLSFLTGLETITSKHSYLSKM 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,978,698
Number of Sequences: 27780
Number of extensions: 359504
Number of successful extensions: 774
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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