Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_H21
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 34 0.030
SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces p... 31 0.16
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 30 0.49
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 29 0.65
SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster ... 28 1.5
SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces ... 27 3.5
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 27 3.5
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.6
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 26 6.1
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 26 6.1
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 26 8.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 8.1
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 33.9 bits (74), Expect = 0.030
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +3
Query: 516 TDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSRALPASTVAPSEPFSRSETPTALVTA- 692
T S P + S + S + P +A++T+S + AST A + SRS PT +
Sbjct: 299 TTSNTSPQISSTISSSSFIVESPSVALSTSSTTTITNASTPAANTIISRSSKPTDTTNSI 358
Query: 693 KTPKTFPDVRITMVT 737
T P+ T +T
Sbjct: 359 SFANTTPENTSTQIT 373
>SPAC13F5.04c |||endosomal sorting protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 277
Score = 31.5 bits (68), Expect = 0.16
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +3
Query: 414 PPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVTLI-PKI 590
P S +LPT + S +S + QT RPP SPT + T I P +
Sbjct: 138 PSTTSITENLPTIDPTRSTRSSSHIQSLSPESKQTSDGHRPP--SPTSITTTSTSIDPSV 195
Query: 591 AVNTTSVSRALPASTVAPSEPFSRSETPT 677
A ++ S +T + P SR PT
Sbjct: 196 AFSSKST-----LATTRTNAPLSRPSQPT 219
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.49
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 534 PPVRSPTLARSVVTLIPKIAVNTTSVSRALPASTVAPSEPFSRSETPTALVTAKTP 701
P +RS +L S V LIP + + + S + PAS P S S + + V + P
Sbjct: 439 PSIRSLSLRPSQVPLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMP 494
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.5 bits (63), Expect = 0.65
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Frame = +3
Query: 516 TDSAARPPVRSPTLARSVVT---LIPKIAVNTTSV-------SRALPASTVAPSEPFSRS 665
TD PP S T + S +T +IP + TT+ S LP+S ++ + S S
Sbjct: 184 TDIVTLPPPASSTSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSS 243
Query: 666 ETPTALVTA-KTPKTFPDVRITMVT 737
PT+++T+ TP T ++ T
Sbjct: 244 VLPTSIITSTSTPVTVSSSSLSSFT 268
>SPAC1F7.11c |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 782
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
Frame = +2
Query: 164 ISCDKYWKCDN----GVAELKTCGNGLAFDATDS--KYLTENCDYLHN 289
+ CD+ W C+N G+ L C NG+ +D K L D L N
Sbjct: 30 LKCDRVWPCENCKKRGIPNL--CPNGILVSVSDKLIKLLLSRIDTLQN 75
>SPCC16C4.07 |scw1||RNA-binding protein Scw1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 561
Score = 27.1 bits (57), Expect = 3.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 513 QTDSAARPPVRSPTLARSVVTLIPKIAVNTTSVSRALPASTVAPSEPFS 659
Q SA P R + + T P +TS AST++PS PFS
Sbjct: 348 QNSSAQSPHPRVFSANSAFSTTSPPPLTPSTSRDYPFSASTISPSTPFS 396
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 522 SAARPPVRSPTLARSVVTLIPKIAVNTTSVSRALPASTVAPSEPFSRSETPTA 680
S+ RP S A S T P A + T VS+ + AST +EP ++ TP++
Sbjct: 310 SSTRPS--SADTAGSPATSPPATADSKTIVSKTISASTTQQTEPLQQT-TPSS 359
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.6
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 525 AARPPVRSPTLARSVVTLIPKIAVNTTSVSRALPASTVAPSEPFSRSETPTALVTAKTPK 704
++RPP R P+L+ IP + T S P +AP S P T+K P
Sbjct: 238 SSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPV-----SMNPAINSTSKPPL 292
Query: 705 TFPDVRIT 728
P R++
Sbjct: 293 PPPSSRVS 300
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 188 CDNGVAELKTCGNGLAFDATDSKYLTENCDYLHNVEC 298
C N V LK NG + S+ L+E C Y N C
Sbjct: 374 CSNAVKNLKCSANGTPSGSKISQVLSELC-YYDNKAC 409
>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 447
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 690 QLPVPSASPILKTVPMGQP 634
+LPVPS +PIL T P+ P
Sbjct: 56 KLPVPSTNPILTTEPIVGP 74
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = -1
Query: 589 IFGMSVTTERASVGDLT-GGRAAESV--CYFFVFALRNLIS 476
+FG VTTE + + DLT RA + V Y + FA +NL++
Sbjct: 213 LFGSKVTTEFSQINDLTLIARAHQLVQEGYKYHFADKNLVT 253
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.8 bits (54), Expect = 8.1
Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +3
Query: 414 PPAISAAPDLPTTESPASACGLIRFRSAKTKK*QTDSAARPPVRSPTLARSVVT---LIP 584
P + ++ P +T +P S F + T T SA+ P S + S T
Sbjct: 632 PTSSASTPLSNSTVAPTSTFTSSGFNT--TSGLPTSSASTPSSNSSIVPTSTFTSSGFNT 689
Query: 585 KIAVNTTSVSRALPASTVAPSEPFSRS 665
+ T+S S L STVAP+ F+ S
Sbjct: 690 TSGLPTSSASTPLSNSTVAPTSTFTSS 716
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,396,592
Number of Sequences: 5004
Number of extensions: 71056
Number of successful extensions: 270
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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