Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H18
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CBA24 Cluster: hypothetical protein TTHERM_0055...    40   0.033
UniRef50_Q4QF26 Cluster: Presenilin-like aspartic peptidase, put...    33   2.9  
UniRef50_Q6BTN8 Cluster: Similar to CA5836|IPF428 Candida albica...    33   2.9  
UniRef50_A3GH19 Cluster: Predicted protein; n=4; Saccharomycetal...    33   3.8  
UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5...    32   5.0  
UniRef50_A7FYP5 Cluster: Integral membrane protein TIGR01906; n=...    31   8.8  

>UniRef50_UPI00006CBA24 Cluster: hypothetical protein
           TTHERM_00558430; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00558430 - Tetrahymena
           thermophila SB210
          Length = 1322

 Score = 39.5 bits (88), Expect = 0.033
 Identities = 17/44 (38%), Positives = 27/44 (61%)
 Frame = -1

Query: 188 KVLKQL*LKINFLVNVKVKEFINSQRRNVDSYVFLFVNLHSLKL 57
           K+L    LK NFL+++K  +F NS   N+++Y+ L+ N   L L
Sbjct: 728 KILSNKYLKNNFLIDLKYFDFSNSSNNNLNTYILLYCNFERLNL 771


>UniRef50_Q4QF26 Cluster: Presenilin-like aspartic peptidase,
           putative; n=3; Leishmania|Rep: Presenilin-like aspartic
           peptidase, putative - Leishmania major
          Length = 352

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 239 FSSFIYYYFHISF*LIPWIE-NLVSSNLLMLHVWLKLY 349
           F++ + Y+FH+ F L  W+  + VS   ++L +WL L+
Sbjct: 88  FATVVLYHFHLQFVLYGWLAFSAVSMFFMLLWIWLDLF 125


>UniRef50_Q6BTN8 Cluster: Similar to CA5836|IPF428 Candida albicans;
           n=2; Saccharomycetaceae|Rep: Similar to CA5836|IPF428
           Candida albicans - Debaryomyces hansenii (Yeast)
           (Torulaspora hansenii)
          Length = 240

 Score = 33.1 bits (72), Expect = 2.9
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +3

Query: 159 YFKLKLFENFRYIHFSLIYYLILWELALVLSFIITFTSVF 278
           +FK +L  NF Y+ FS   +L  W L+ V +  I F  VF
Sbjct: 108 FFKNELIANFLYMFFSFAGFLAFWLLSWVTTNFILFIIVF 147


>UniRef50_A3GH19 Cluster: Predicted protein; n=4;
           Saccharomycetales|Rep: Predicted protein - Pichia
           stipitis (Yeast)
          Length = 505

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +3

Query: 159 YFKLKLFENFRYIHFSLIYYLILWELALVLSFIITFTSVF 278
           YFK +L  NF YI  S + Y + W  A     ++ F  VF
Sbjct: 373 YFKTELMANFVYIILSTLGYFVFWLFAATNWVVLLFLVVF 412


>UniRef50_O97275 Cluster: Putative uncharacterized protein MAL3P5.4;
           n=2; Plasmodium|Rep: Putative uncharacterized protein
           MAL3P5.4 - Plasmodium falciparum (isolate 3D7)
          Length = 1816

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 11/38 (28%), Positives = 25/38 (65%)
 Frame = -1

Query: 167 LKINFLVNVKVKEFINSQRRNVDSYVFLFVNLHSLKLH 54
           L  N ++N K   F+N ++ N+ +Y+ ++VN++ + L+
Sbjct: 879 LNKNIIINKKYFHFLNQEKINIRNYINIYVNINKIYLN 916


>UniRef50_A7FYP5 Cluster: Integral membrane protein TIGR01906; n=4;
           Clostridium botulinum|Rep: Integral membrane protein
           TIGR01906 - Clostridium botulinum (strain ATCC 19397 /
           Type A)
          Length = 214

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = +3

Query: 156 VYFKLKLFENFRYIHFSLIYYLILWELALVLSFIITFTSVFD*YH 290
           +Y+KLK+ +N  ++ +S I  +I+  L L++  I+ F   F  +H
Sbjct: 116 IYYKLKITKNVSFLKYSSISTIII-PLLLIIPLILNFDKGFTFFH 159


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 309,419,944
Number of Sequences: 1657284
Number of extensions: 4931280
Number of successful extensions: 12157
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12152
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)