Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H11
         (684 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   1.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   9.4  

>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
          protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 12 HHHSXNKPPSISPFE 56
          HHH   +PP  SP++
Sbjct: 55 HHHLQARPPQDSPYD 69


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 87   PKAWHKAANKSPD 125
            PK W    NK PD
Sbjct: 2445 PKCWQVDCNKGPD 2457


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 252 KAVPESDIEYTEQRERSNTLTDGSKIVDDIKV 347
           K +    I+      ++ T+TD  K  +DIK+
Sbjct: 257 KIIRNDFIDLLSNLRKTETITDSYKFDNDIKM 288


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 9.4
 Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 1/21 (4%)
 Frame = +3

Query: 69  HAGSHQPKAWHKAANK-SPDH 128
           H   H+P  WH+   K +P H
Sbjct: 87  HLMIHRPNWWHELETKFNPHH 107


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,636
Number of Sequences: 336
Number of extensions: 3073
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)