Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_H10
(785 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 25 0.69
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 24 1.2
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 2.1
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 23 2.8
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 22 4.8
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 6.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.4
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 25.0 bits (52), Expect = 0.69
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 203 KDVKLENGNAPGASNGTSSKSEDNA 277
K VK NGN S+ + S SE+N+
Sbjct: 392 KHVKTHNGNGKKGSSDSCSDSEENS 416
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 24.2 bits (50), Expect = 1.2
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 317 GDPKSDGKAITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKLKSVKLGID 466
GDP +TL D W++ + + + I T + F +K G+D
Sbjct: 21 GDPTERDLIVTLDDRDLWLR-FECLTNEMIVTKNGRRMFPVVKVTAAGLD 69
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.4 bits (48), Expect = 2.1
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 332 DGKAITLSQSDKWMKQAKVIDGKKITTTDTAIH-FKKLKSVKLGIDDYQKFLDDLAKNKK 508
D + + L+ S + ++Q K++ + + F++L K D Y+KF + +KN K
Sbjct: 379 DSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFEELAEDK---DGYKKFYEQFSKNIK 435
Query: 509 VELDE 523
+ + E
Sbjct: 436 LGIHE 440
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 23.0 bits (47), Expect = 2.8
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 593 AAAVDRLTDTSKYTGSHRQRF-DETG*GKGIAGRKDLXDGSGYVTGY 730
A V R+ D SK GS+ R DE G G +D D +GY Y
Sbjct: 356 AFQVKRVPDPSKRKGSYIFRLPDENNNGGFWVGYED-TDTAGYKASY 401
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 22.2 bits (45), Expect = 4.8
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = -2
Query: 538 QLLLNFVKFHFFVLREII*KLLVVVDAEFYRFEFFEVNSRVRCCYFL---SINNFGLF 374
Q ++ F+K+HFF ++ +L F F EV V+ CY L ++ G+F
Sbjct: 81 QFIVRFMKYHFFGTLKLWSQL-------FSTFAGIEVLHVVKQCYHLQKINVQQSGIF 131
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = +1
Query: 565 ITRYKITGS-RSGRRSIDRHEQIY 633
IT Y + GR+ + +H+QIY
Sbjct: 11 ITDYDLNNEFYRGRKKLSKHQQIY 34
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 496 REII*KLLVVVDAEFYRFE 440
R + K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 496 REII*KLLVVVDAEFYRFE 440
R + K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 496 REII*KLLVVVDAEFYRFE 440
R + K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 496 REII*KLLVVVDAEFYRFE 440
R + K L VVD ++Y FE
Sbjct: 594 RRVAQKYLRVVDPDYYEFE 612
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,591
Number of Sequences: 336
Number of extensions: 3503
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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