Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H09
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin pr...   149   1e-38
AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin pr...   149   1e-38
AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin pr...   125   2e-31
AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin pr...   123   1e-30
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   2.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.5  

>AF506023-1|AAM46899.1|   76|Tribolium castaneum polyubiquitin
           protein.
          Length = 76

 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76


>AF506022-1|AAM46898.1|  685|Tribolium castaneum polyubiquitin
           protein.
          Length = 685

 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 61  IQKESTLHLVLRLRGG 76



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 77  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 137 IQKESTLHLVLRLRGG 152



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 213 IQKESTLHLVLRLRGG 228



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 289 IQKESTLHLVLRLRGG 304



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 365 IQKESTLHLVLRLRGG 380



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 517 IQKESTLHLVLRLRGG 532



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 593 IQKESTLHLVLRLRGG 608



 Score =  149 bits (361), Expect = 1e-38
 Identities = 73/76 (96%), Positives = 73/76 (96%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 669 IQKESTLHLVLRLRGG 684



 Score =  146 bits (355), Expect = 8e-38
 Identities = 72/76 (94%), Positives = 72/76 (94%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440

Query: 189 IQKESTLHLVLRLRGG 236
           IQKESTLHLVLRLRGG
Sbjct: 441 IQKESTLHLVLRLRGG 456


>AF506021-1|AAM46897.1|   64|Tribolium castaneum polyubiquitin
           protein.
          Length = 64

 Score =  125 bits (302), Expect = 2e-31
 Identities = 61/64 (95%), Positives = 61/64 (95%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1   MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60

Query: 189 IQKE 200
           IQKE
Sbjct: 61  IQKE 64


>AF506020-1|AAM46896.1|  112|Tribolium castaneum polyubiquitin
           protein.
          Length = 112

 Score =  123 bits (296), Expect = 1e-30
 Identities = 60/64 (93%), Positives = 60/64 (93%)
 Frame = +3

Query: 9   MQIFVKTLTGXPITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 188
           MQIFVKTLTG  ITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYN
Sbjct: 49  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108

Query: 189 IQKE 200
           IQKE
Sbjct: 109 IQKE 112



 Score =  102 bits (245), Expect = 2e-24
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +3

Query: 93  KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 236
           KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 1   KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 48


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/15 (53%), Positives = 12/15 (80%), Gaps = 1/15 (6%)
 Frame = -2

Query: 163  SSNCF-PAKMRRCWS 122
            S+ CF P+K+R CW+
Sbjct: 1112 SNRCFFPSKIRICWN 1126


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 100 WILALTFSIVSEASTSNVMGFPVRVLTKICIV 5
           WI+  T S +S+        F V +  K C+V
Sbjct: 167 WIVLYTLSKMSQVMLIQFCAFVVVLKQKFCVV 198


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 122 RPTTSHLCRETIRRWPHSFRL*HPERIHT 208
           +P    +C+   R++  S+ L   ER HT
Sbjct: 75  KPKRQFICKYCNRQFTKSYNLLIHERTHT 103


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 140 DETLLVWRNTFLVLDFSF 87
           D  ++  R +FLV DF F
Sbjct: 479 DAAMMALRTSFLVNDFGF 496


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,158
Number of Sequences: 336
Number of extensions: 2551
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)