Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H03
         (451 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230...    33   0.14 
07_03_0179 + 14801037-14801108,14801325-14802788                       31   0.32 
10_06_0010 + 9574265-9574524,9574629-9574956,9576663-9576788,957...    31   0.43 
05_07_0216 + 28461783-28461788,28461837-28462295,28463198-284633...    31   0.43 
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489...    30   0.75 
03_03_0246 + 15789635-15794227,15794314-15794555,15794630-157947...    29   1.7  
09_05_0008 + 20042390-20042845,20043323-20043457,20043539-200436...    29   2.3  
05_04_0209 - 19073147-19074041,19074117-19074163,19074258-190744...    29   2.3  
02_02_0629 + 12386214-12386533,12386666-12386749,12386834-123869...    29   2.3  
05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718     28   3.0  
04_04_0871 + 28898262-28898534,28899552-28900015,28900242-289003...    28   3.0  
11_06_0316 + 22323814-22324692                                         28   4.0  
10_08_0842 - 20954712-20957738                                         28   4.0  
11_04_0097 + 13448740-13450725                                         27   5.3  
05_01_0542 + 4729099-4729419,4730837-4731086,4731387-4731751           27   5.3  
03_03_0254 + 15884149-15884295,15884765-15884803,15884958-158851...    27   5.3  
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581...    27   7.0  
08_02_0196 - 14125037-14125175,14125525-14125604,14125938-141264...    27   7.0  
02_01_0170 - 1174224-1174321,1174429-1174588,1174673-1174823,117...    27   7.0  
01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819     27   7.0  
11_06_0656 + 25926192-25926289,25927530-25927659,25928248-259282...    27   9.2  
11_06_0632 + 25674807-25675477,25676472-25677861,25677948-256780...    27   9.2  
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591...    27   9.2  
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275...    27   9.2  
02_01_0304 + 2037718-2037939,2038169-2038384,2038862-2039329,203...    27   9.2  

>04_04_0378 -
           24822436-24822521,24822623-24822738,24823010-24823092,
           24823772-24823918,24824004-24824051,24824153-24824353,
           24824981-24825152,24825235-24825299,24825813-24825939,
           24826436-24826528,24826608-24826696,24826804-24826950,
           24827047-24827359,24827474-24828048
          Length = 753

 Score = 32.7 bits (71), Expect = 0.14
 Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
 Frame = +3

Query: 117 TVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIK-------ALEE 275
           TVG +  +  ++ +S ++ KL  +E +E++I++ + ++EKE  + LE+        AL+E
Sbjct: 498 TVGTVLPS--EDSVSDRKRKLEFLEMQEELIKEEEKRQEKEDKAKLEVPKATEEDVALKE 555

Query: 276 MASGTAKK*KD 308
           M   TA++ K+
Sbjct: 556 MTEPTAREEKE 566


>07_03_0179 + 14801037-14801108,14801325-14802788
          Length = 511

 Score = 31.5 bits (68), Expect = 0.32
 Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
 Frame = +3

Query: 48  SDLPYGAPVRISPLIKFGRWSFLTVGVLYGAFHQNRLSKKE-AKLREIEAKEKVIRDAKL 224
           +DLP  AP+ + PL    R++FL   V       ++LSK+E A+L  +  K + +    L
Sbjct: 389 TDLPSRAPIELKPLPSGLRYAFLNGDVESPVIISDKLSKEETARLIAVLEKHRAVFGYSL 448

Query: 225 KEEK 236
           ++ K
Sbjct: 449 QDLK 452


>10_06_0010 +
           9574265-9574524,9574629-9574956,9576663-9576788,
           9576948-9577067,9577350-9577562,9577653-9577764,
           9578033-9578217,9578310-9578660,9578826-9579383
          Length = 750

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = +3

Query: 21  TVQQFYNKMSDLPYGAPVRISPLIKFGRWSFLTVGVLY---GAFHQNRL 158
           T Q+FY  + D P+G  + +S L+K GR      G+ Y   G FH+ ++
Sbjct: 327 TPQKFYGALKDDPFGNQLEVS-LMKVGRGIAGLQGIFYCGTGCFHRRKV 374


>05_07_0216 +
           28461783-28461788,28461837-28462295,28463198-28463315,
           28463350-28463609,28465220-28465525
          Length = 382

 Score = 31.1 bits (67), Expect = 0.43
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +2

Query: 98  WTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAEGGERKSL 247
           WT +L   ++++RRL   +   +R  T +  SQ+  H +      E K L
Sbjct: 139 WTFLLREIKAAVRRLQELRGEPKRRHTNQQLSQKRNHQKWNTNADEEKKL 188


>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
            28649069-28649144,28649356-28649426,28649524-28649589,
            28649677-28649766,28649874-28650050,28650513-28650548
          Length = 1442

 Score = 30.3 bits (65), Expect = 0.75
 Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
 Frame = +3

Query: 27   QQFYN-KMSDLPYGAPVRISPLIKFGRWSFLTVGVL--YGAFH--QNRLSKKEAKLREIE 191
            QQF++ K S LP  A   I       R     V  L   G+    + R   KEA  R  E
Sbjct: 1065 QQFHSEKSSSLPKSAEGHIPSSADISRKETPGVQRLKEQGSLRTEREREKDKEASRRLEE 1124

Query: 192  AKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 320
             KE   RD K ++E+E A   E K LEE      ++ KD++ +
Sbjct: 1125 TKE---RDKKFEKEREIAEERERKKLEEQERERERE-KDRLAV 1163


>03_03_0246 +
           15789635-15794227,15794314-15794555,15794630-15794771,
           15796089-15796272,15796349-15796696,15796753-15797450,
           15798208-15798900
          Length = 2299

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/40 (32%), Positives = 27/40 (67%)
 Frame = +3

Query: 147 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKA 266
           + R+ +++A+ REI  K++  R+  ++EE+ER   +E +A
Sbjct: 484 RQRVLEEQARAREIVRKQEEERERLIREEEERQRLVEEEA 523


>09_05_0008 +
           20042390-20042845,20043323-20043457,20043539-20043679,
           20043771-20043882,20044084-20044154,20044251-20044405,
           20044484-20044595,20044932-20045033,20045116-20045176,
           20045251-20045422,20045512-20045608,20045692-20045786,
           20045881-20046014,20046208-20046422
          Length = 685

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = +3

Query: 162 KKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 320
           KKE K ++ +AKE     +   EE+ER+S    +          +K K+K+V+
Sbjct: 28  KKEKKEKKRKAKEPSPSSSSSSEEEERSSTSSDEPAPAAKKAKKEKTKEKVVV 80


>05_04_0209 -
           19073147-19074041,19074117-19074163,19074258-19074437,
           19074839-19074955,19075105-19075227,19075391-19075776,
           19076177-19076303,19077140-19077202,19078035-19078086,
           19078189-19080023
          Length = 1274

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 150 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 257
           + + KK   +  + A  +++ D KLKEEK + + LE
Sbjct: 816 DEIDKKVTLMSNVTAINQMLEDIKLKEEKTKQAVLE 851


>02_02_0629 +
           12386214-12386533,12386666-12386749,12386834-12386972,
           12387990-12388061,12388158-12388252,12388397-12388483,
           12388554-12388629,12388738-12389031,12389526-12389665,
           12389751-12389939,12390028-12390118,12390206-12390332,
           12391146-12391253,12391343-12391433,12391676-12391685
          Length = 640

 Score = 28.7 bits (61), Expect = 2.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 153 RLSKKEAKLREIEAKEKVIRDAKLKEEKERASALE 257
           R +  +AKLR  +AKEK +R+    + KE A+ +E
Sbjct: 515 RRNDAKAKLRAAKAKEKELREGLKNDMKEGATPIE 549


>05_05_0134 + 22619297-22619801,22619879-22621960,22622067-22623718
          Length = 1412

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 168  EAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIV 317
            E ++ E  + EK++ D +L EE     A     +EE  S T +  +DK+V
Sbjct: 964  EVQVAETTSTEKIVEDKELAEETTEGEATAEVHIEE-TSTTERTVEDKVV 1012


>04_04_0871 +
           28898262-28898534,28899552-28900015,28900242-28900356,
           28900510-28901157,28901282-28901374,28901658-28901795,
           28902147-28902206
          Length = 596

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 14/45 (31%), Positives = 29/45 (64%)
 Frame = +3

Query: 159 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTA 293
           +KK+A+ +E++ K K  R+ + ++EKE+A A + +  +    GT+
Sbjct: 505 AKKKARAKELK-KLKKAREKEKEKEKEKAQASQSQRTQSNVRGTS 548


>11_06_0316 + 22323814-22324692
          Length = 292

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +2

Query: 56  TIRSTCAYIASNQVWTLVLPHRRSSIRRLPPEQAIKERSETTRD*SQRE 202
           TI S    ++S      ++ H R+ I R  P+Q  ++RSE +RD + RE
Sbjct: 210 TISSGSCELSSPDCLEQLVVHERT-ITRWIPQQCREQRSEASRDEANRE 257


>10_08_0842 - 20954712-20957738
          Length = 1008

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 13/41 (31%), Positives = 25/41 (60%)
 Frame = +3

Query: 159 SKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMA 281
           ++++A L E++ +EK+    +LKEE+ R   ++  A E  A
Sbjct: 680 AQRKAYLEELDYREKLFYKKQLKEERMRRKIMKKMAAEASA 720


>11_04_0097 + 13448740-13450725
          Length = 661

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = +3

Query: 126 VLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAK 296
           +L GA  ++       KL E   +EK    A+  EEK RA AL  K  EE     AK
Sbjct: 541 LLEGALQKDGRDGDMTKLYEDVEREKAEAAARAAEEKARAEAL-AKEEEERKKAEAK 596


>05_01_0542 + 4729099-4729419,4730837-4731086,4731387-4731751
          Length = 311

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
 Frame = +3

Query: 147 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEI---KALEEMASGTAKK 299
           + +LSKKE K +E+E  + ++ + +L  +    +  E    K  E+ A G  K+
Sbjct: 152 ERQLSKKELKKKELEELDAILAELELSSKSNNDAQNETNGKKGAEQAADGENKE 205


>03_03_0254 +
           15884149-15884295,15884765-15884803,15884958-15885136,
           15887175-15887310,15887769-15887865,15888448-15888534,
           15888621-15888721,15888905-15888939,15889520-15889577,
           15889650-15889724,15890048-15890135,15890155-15890308,
           15890395-15890638
          Length = 479

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
 Frame = +3

Query: 186 IEAKEKVIRDAKLKEEKERASALE-IKAL 269
           ++AKE +I  A  KE KER+S+ E IKAL
Sbjct: 198 LDAKELLIYAAGAKESKERSSSWEFIKAL 226


>08_02_0531 +
           18256597-18256836,18257637-18257735,18258038-18258184,
           18258295-18258427,18258521-18258585,18258792-18258962,
           18259095-18259199,18259495-18259602,18259792-18260088,
           18260191-18260256,18260477-18260679,18261178-18261232,
           18261318-18261503,18261701-18261985
          Length = 719

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +3

Query: 150 NRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KD 308
           N LS+KEAKLR ++  E + R      EKE  S   +++L  M     K+  D
Sbjct: 238 NELSEKEAKLRRLQ--EDLSR-----REKEHVSDASLQSLRSMVMALQKENSD 283


>08_02_0196 -
           14125037-14125175,14125525-14125604,14125938-14126463,
           14126809-14126852,14127444-14127584,14127696-14128463
          Length = 565

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 40  TKCQIYHTEHLCVYRL*SSLDVGPSSP*EFYTAPSTRT 153
           TKC++ + +++ V    + LDV   +P +    P+TRT
Sbjct: 245 TKCEVEYIQNISVDEKENKLDVTQPAPFQEQVPPTTRT 282


>02_01_0170 -
           1174224-1174321,1174429-1174588,1174673-1174823,
           1175005-1175156,1175647-1175768,1176773-1176785
          Length = 231

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = +3

Query: 108 SFLTVGVLYGAFHQNRLSKKEAKLREIEAKEKVIRDAKLKEEKERAS 248
           SF  +G+L      +  S K A  ++I +    I + K+K EKE A+
Sbjct: 148 SFHYMGLLKNVMRLSMASLKGADAKDISSSIAAIANEKIKAEKEAAA 194


>01_06_0316 - 28419072-28419373,28419405-28420502,28420600-28420819
          Length = 539

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = +3

Query: 147 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEE 275
           Q++LSK+E +   +EAKE +  D    EEKER  A  +  LEE
Sbjct: 501 QSQLSKEEIERMTMEAKEYMAAD----EEKERIKAKNL--LEE 537


>11_06_0656 +
           25926192-25926289,25927530-25927659,25928248-25928294,
           25929274-25929388,25929504-25929753,25930079-25930239,
           25930372-25930567,25930672-25930836,25930918-25931070,
           25931160-25931248,25931385-25931423,25931460-25931681,
           25933503-25934165
          Length = 775

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 122 RSSIRRLPPEQAIKERSETTRD*SQREGHPRCQAEGGERKS 244
           R  +RR PPEQA     E  R  +  E   R +AE G+ ++
Sbjct: 601 RGWLRRPPPEQARASTVEAGRSNADVEACAREEAEAGKEEA 641


>11_06_0632 +
           25674807-25675477,25676472-25677861,25677948-25678083,
           25678185-25678282,25678470-25678535,25678699-25678827,
           25679570-25679746,25680576-25680614
          Length = 901

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = +3

Query: 147 QNRLSKKEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK 299
           Q RL +KE +L + + +E+   +   KE +ERASA      E  A+  A++
Sbjct: 522 QRRL-EKERELEQQKERERQAMERATKEARERASAEARAKAEREATQRAQR 571


>07_01_0769 +
           5908942-5908946,5909085-5909666,5910370-5910429,
           5910635-5910674,5910767-5910860,5911582-5911952
          Length = 383

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +3

Query: 99  GRWSFLTVGVLYGAFH-QNRLSKKEAKLREIEAK-EKVIRDAKLKEEKERASALEI 260
           GR  F+T+  +  +F    RL  K      +  + + +++DAK K EKER + L++
Sbjct: 167 GREEFITISDIETSFEFDGRLVGKRLVDANVATEIQTIVQDAKGKFEKERQNYLKV 222


>03_05_0776 +
           27625122-27625415,27627226-27627273,27627455-27627514,
           27627633-27627802,27627901-27627973,27628096-27628161,
           27628262-27628345,27628681-27628758,27629009-27629092,
           27629835-27630137,27630227-27630397,27630971-27631161,
           27631284-27631686,27632246-27632497,27632577-27633077,
           27633181-27633278,27633400-27633499,27633722-27633867,
           27633973-27634138
          Length = 1095

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 180 REIEAKEKVIRDAKLKEEKE-RASALEIKALEEMASGTAKK*KDK 311
           +E+E K K  + AK KEEK  +A A E   L+  A+    K  +K
Sbjct: 103 KELERKLKKDQKAKEKEEKRLKAKAKEAARLQAQAASDGPKKSEK 147


>02_01_0304 +
           2037718-2037939,2038169-2038384,2038862-2039329,
           2039419-2040171
          Length = 552

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = +3

Query: 165 KEAKLREIEAKEKVIRDAKLKEEKERASALEIKALEEMASGTAKK*KDKIVI 320
           K  KLR  +AKE  +   K + E+E A+A E+ A  ++ S   K   +K V+
Sbjct: 81  KGGKLRLEKAKEHYLTRLKREWEQEAAAAQEMPASADVESKKEKLELNKAVL 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,181,898
Number of Sequences: 37544
Number of extensions: 147287
Number of successful extensions: 536
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 871620292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)