SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_H02
         (797 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q01HJ7 Cluster: H0117D06-OSIGBa0088B06.1 protein; n=3; ...    37   0.51 
UniRef50_Q189T3 Cluster: Glycerol kinase; n=3; Clostridium diffi...    36   0.89 
UniRef50_Q9BPR4 Cluster: Cuticle protein; n=1; Bombyx mori|Rep: ...    36   0.89 
UniRef50_Q1DPC4 Cluster: Putative uncharacterized protein; n=1; ...    35   2.1  
UniRef50_A5NSB4 Cluster: PE-PGRS family protein; n=1; Methylobac...    34   3.6  
UniRef50_Q9Q6Q5 Cluster: RNA-directed RNA polymerase; n=124; Bir...    34   3.6  
UniRef50_UPI0000D9DC8C Cluster: PREDICTED: hypothetical protein;...    34   4.8  
UniRef50_A4TCW6 Cluster: Putative sugar transferase; n=1; Mycoba...    34   4.8  
UniRef50_P19706 Cluster: Myosin heavy chain IB; n=5; Eukaryota|R...    29   5.1  
UniRef50_UPI0000D5595D Cluster: PREDICTED: hypothetical protein;...    29   5.2  
UniRef50_Q9SFY6 Cluster: T22C5.18; n=9; rosids|Rep: T22C5.18 - A...    33   6.3  
UniRef50_UPI000155C48F Cluster: PREDICTED: similar to TSGA2; n=1...    33   8.3  
UniRef50_UPI00015A6056 Cluster: UPI00015A6056 related cluster; n...    33   8.3  
UniRef50_Q6DIT5 Cluster: Hrg protein; n=7; Xenopus|Rep: Hrg prot...    33   8.3  
UniRef50_Q3W0D0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.3  
UniRef50_Q9SUX1 Cluster: Putative glycine-rich protein; n=1; Ara...    33   8.3  
UniRef50_Q2UFW9 Cluster: Dehydrogenases with different specifici...    33   8.3  

>UniRef50_Q01HJ7 Cluster: H0117D06-OSIGBa0088B06.1 protein; n=3;
           Oryza sativa|Rep: H0117D06-OSIGBa0088B06.1 protein -
           Oryza sativa (Rice)
          Length = 773

 Score = 37.1 bits (82), Expect = 0.51
 Identities = 21/67 (31%), Positives = 28/67 (41%)
 Frame = -1

Query: 707 RSMXXYGGXSADIHAGLMRHGCWGYCSDHGGSIGVSYDGSSDCVGDDCWARDHIHAGLVR 528
           R++   GG + D   G +  GC   C    G++ V+ D    C G  C  R  I  GL  
Sbjct: 147 RTLAYIGGDNVDADVGSLTTGCVATCRLQAGNLTVTDDDVGACSGIGC-CRTSIPVGLQY 205

Query: 527 NRSWSDD 507
              W DD
Sbjct: 206 YYVWFDD 212


>UniRef50_Q189T3 Cluster: Glycerol kinase; n=3; Clostridium
           difficile|Rep: Glycerol kinase - Clostridium difficile
           (strain 630)
          Length = 508

 Score = 36.3 bits (80), Expect = 0.89
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 620 GGSIGVSYDGSSDCVGDDC-WARDHIHAGLVRNRSWSDDGSTVSQVTQGTFFQPVSMTVT 444
           G  +  +YDG     G    W RD I  G+++N S +DD +     T G +F P    + 
Sbjct: 297 GDKVTYAYDGGVYIAGAAIQWLRDGI--GVIKNYSETDDMANSISSTGGVYFVPAFAGIA 354

Query: 443 SKYW 432
           + YW
Sbjct: 355 APYW 358


>UniRef50_Q9BPR4 Cluster: Cuticle protein; n=1; Bombyx mori|Rep:
           Cuticle protein - Bombyx mori (Silk moth)
          Length = 291

 Score = 36.3 bits (80), Expect = 0.89
 Identities = 17/29 (58%), Positives = 18/29 (62%)
 Frame = +3

Query: 711 APYAHGIITPYAHHAGLFHSAPLVHSXPL 797
           AP  H   TP  H A L HSAP+VHS PL
Sbjct: 225 APVVHS--TPVVHSAPLIHSAPVVHSAPL 251



 Score = 33.5 bits (73), Expect = 6.3
 Identities = 15/29 (51%), Positives = 17/29 (58%)
 Frame = +3

Query: 711 APYAHGIITPYAHHAGLFHSAPLVHSXPL 797
           AP  H    P  H A L+H+ PLVHS PL
Sbjct: 249 APLVHS--GPVVHTASLYHATPLVHSAPL 275


>UniRef50_Q1DPC4 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 477

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -1

Query: 176 QDDSGMMRGLRHRQKGAASHRGESEQHHHRFHNE 75
           +DD+ M  GL+H Q G   H G+S+   H  H++
Sbjct: 132 EDDNNMHEGLKHIQFGGGDHHGDSKHGRHMQHDD 165


>UniRef50_A5NSB4 Cluster: PE-PGRS family protein; n=1;
           Methylobacterium sp. 4-46|Rep: PE-PGRS family protein -
           Methylobacterium sp. 4-46
          Length = 207

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = -3

Query: 201 CPEAGRGGPGRQRDDAGAAPPAKRSRKPQRRER 103
           CP   RGG G  RD  G  PPA+R R   RR R
Sbjct: 130 CPGGARGGGGGGRDP-GPVPPARRDRDGPRRAR 161


>UniRef50_Q9Q6Q5 Cluster: RNA-directed RNA polymerase; n=124;
           Birnaviridae|Rep: RNA-directed RNA polymerase - Avian
           infectious bursal disease virus (IBDV) (Gumboro disease
           virus)
          Length = 881

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 2/149 (1%)
 Frame = -1

Query: 575 GDDCWARDHIHAGL--VRNRSWSDDGSTVSQVTQGTFFQPVSMTVTSKYWCSVGGVCEDW 402
           G+    R H+ A +  +  R WSD+G  +   T  TF   ++  +     C +  +    
Sbjct: 420 GEANCTRQHMQAAMYYILTRGWSDNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKT 479

Query: 401 CGNSVAIDGGAGTYINTRLMXXXXXXXXXXXXXSYNRRDSSVHERSVVSFQYFSLKVESA 222
            G      G A T+IN  L+                 R  S   +S+      + K+E  
Sbjct: 480 YGQG---SGNAATFINNHLLSTLVLDQWNLMR---QPRPDSEEFKSIEDKLGINFKIE-R 532

Query: 221 SVDDFRGVQRPAVGVQDDSGMMRGLRHRQ 135
           S+DD RG  R  V +     +  G+   Q
Sbjct: 533 SIDDIRGKLRQLVLLAQPGYLSGGVEPEQ 561


>UniRef50_UPI0000D9DC8C Cluster: PREDICTED: hypothetical protein;
           n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
           - Macaca mulatta
          Length = 293

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -3

Query: 207 PRCPEAGRGGPGRQRDDAG--AAPPAKRSRKPQRR 109
           P   E GRG  GR+R      AAP A RSR+P RR
Sbjct: 50  PAGAETGRGPGGRERQRGAKFAAPAASRSRRPSRR 84


>UniRef50_A4TCW6 Cluster: Putative sugar transferase; n=1;
           Mycobacterium gilvum PYR-GCK|Rep: Putative sugar
           transferase - Mycobacterium gilvum PYR-GCK
          Length = 283

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = -1

Query: 515 SDDGSTVSQVTQGTFFQPVSMTVTSKYWCSVGGVCEDWCG 396
           S  G TV   T    F  +S  VT+  W +VGG CE++ G
Sbjct: 149 SPPGDTVVCTTDYALFWSLSFAVTADTWRTVGGFCEEYQG 188


>UniRef50_P19706 Cluster: Myosin heavy chain IB; n=5; Eukaryota|Rep:
            Myosin heavy chain IB - Acanthamoeba castellanii (Amoeba)
          Length = 1147

 Score = 29.5 bits (63), Expect(2) = 5.1
 Identities = 16/28 (57%), Positives = 17/28 (60%)
 Frame = -3

Query: 198  PEAGRGGPGRQRDDAGAAPPAKRSRKPQ 115
            P AGRGGPG  R  A A  PA  + KPQ
Sbjct: 1068 PGAGRGGPGAGRGAAPAPAPAAPA-KPQ 1094



 Score = 23.0 bits (47), Expect(2) = 5.1
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 207  PRCPEAGRGGPG 172
            P  P AGRGGPG
Sbjct: 1023 PGGPGAGRGGPG 1034


>UniRef50_UPI0000D5595D Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 99

 Score = 29.1 bits (62), Expect(2) = 5.2
 Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 6/31 (19%)
 Frame = +3

Query: 480 LGHLAYSAPIIA------PAAVSHQSRVDVI 554
           LG+ AY+  ++A      PAAVSHQ R DVI
Sbjct: 22  LGYSAYAPAVVAAPAVAVPAAVSHQYRTDVI 52



 Score = 23.8 bits (49), Expect(2) = 5.2
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
 Frame = +3

Query: 657 QSRVDVRTXPAVXXHGA--------VAPYAHGIITPYAHH-AGLFHSAPLVHS 788
           Q R DV + P V  + A         AP  +     YA H A L ++APL H+
Sbjct: 46  QYRTDVISKPVVATYAAPIVQKTVVAAPAVYSAPLAYAAHGAHLAYAAPLAHA 98


>UniRef50_Q9SFY6 Cluster: T22C5.18; n=9; rosids|Rep: T22C5.18 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 265

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = -1

Query: 173 DDSGMMRGLRHRQKGAASHRGESEQHHHRFHNERGLCFLTM 51
           +DS +  G+ H  KG  S R  S+ HH     E  L F  M
Sbjct: 58  EDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLM 98


>UniRef50_UPI000155C48F Cluster: PREDICTED: similar to TSGA2; n=1;
           Ornithorhynchus anatinus|Rep: PREDICTED: similar to
           TSGA2 - Ornithorhynchus anatinus
          Length = 370

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 121 LAAPFCRWRSPRIIPLSSWTPT 186
           LAA F +WR  +I PL+ WTPT
Sbjct: 262 LAAAFPKWRVSKITPLALWTPT 283


>UniRef50_UPI00015A6056 Cluster: UPI00015A6056 related cluster; n=1;
           Danio rerio|Rep: UPI00015A6056 UniRef100 entry - Danio
           rerio
          Length = 289

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 653 RHGCWGYCSDHGGSIGVSYDGSSDCVGDDCWARDHIHA-GLVRNRSWSDDGSTVS 492
           R+GCW Y    GGS  VS   S  C+     + + +HA G V  +S SD    VS
Sbjct: 155 RYGCWSYLGMTGGSQTVSLQ-SPGCMWSGVASHELMHALGFVHEQSRSDRDRYVS 208


>UniRef50_Q6DIT5 Cluster: Hrg protein; n=7; Xenopus|Rep: Hrg protein
           - Xenopus tropicalis (Western clawed frog) (Silurana
           tropicalis)
          Length = 474

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = -1

Query: 203 GVQRPAVGVQDDSGMMRGLRHRQKGAASHRGESEQHHHRFHNERG 69
           G + P   VQ+ S   R   H+ K   SH+G    HHH   +  G
Sbjct: 291 GQENPEAAVQEKSQRCRH-HHKHKHHPSHKGHKHHHHHHHPHHHG 334


>UniRef50_Q3W0D0 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 205

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 16/69 (23%), Positives = 26/69 (37%)
 Frame = -3

Query: 207 PRCPEAGRGGPGRQRDDAGAAPPAKRSRKPQRRERXXXXXXXXXXXSVFPDDVCRSLQTA 28
           P    + +  P R    +  +PP +R+  P+R+              V PD   RS+  +
Sbjct: 104 PSATMSSKTAPARAPTSSYVSPPPRRTSSPRRQAASSAGKRAAASAPVSPDHAPRSISRS 163

Query: 27  HGRLIIGRP 1
                 GRP
Sbjct: 164 RASARTGRP 172


>UniRef50_Q9SUX1 Cluster: Putative glycine-rich protein; n=1;
           Arabidopsis thaliana|Rep: Putative glycine-rich protein
           - Arabidopsis thaliana (Mouse-ear cress)
          Length = 608

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
 Frame = -1

Query: 689 GGXSADIHAGLMRHGCWG-YCSDHGGSIGVSYDGSSDCVGDDCWARDHIHAGLVRNRSWS 513
           GG    +  G+    C G +    GG  G  + GS   VG DC        G+    S  
Sbjct: 134 GGVFGGVSGGVFGGVCGGVFGGSVGGICGGVFGGS---VGGDC-------GGVFGRASGG 183

Query: 512 DDGSTVSQVTQGTFFQPVSMTVTSKYWCSVGGVCEDWCG 396
             G  V +V+ G F           +  SVGG+C DW G
Sbjct: 184 VFGGIVGRVSGGEFGGVCGGVSGGVFGGSVGGICGDWFG 222


>UniRef50_Q2UFW9 Cluster: Dehydrogenases with different
           specificities; n=7; cellular organisms|Rep:
           Dehydrogenases with different specificities -
           Aspergillus oryzae
          Length = 298

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +1

Query: 94  WCCSLSPLWLAAPFCRWRSPRIIPLSSWTPTA-GLWTPRKSS 216
           W C+ + ++LA P  RW +  I+P+ + T  A G+  P+ +S
Sbjct: 254 WDCATAVVFLAGPHARWMTGVILPVDAGTTAAVGIGMPKSAS 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,670,437
Number of Sequences: 1657284
Number of extensions: 12372248
Number of successful extensions: 48967
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 45092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48848
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68319938570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -