Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G24
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.0  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    22   2.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    22   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 331 YINLCVKLTKPSKMT 375
           Y  +CVKL  P K+T
Sbjct: 330 YPEVCVKLANPQKLT 344


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 224 RTGPFTFLMI*RLVS 180
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 224 RTGPFTFLMI*RLVS 180
           RTG FTFLM+  ++S
Sbjct: 76  RTGSFTFLMVVAVLS 90


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49  HVHQSWRVSKKKHR 8
           H H SW  SKK+ +
Sbjct: 415 HFHASWLKSKKEFK 428


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 49  HVHQSWRVSKKKHR 8
           H H SW  SKK+ +
Sbjct: 422 HFHASWLKSKKEFK 435


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,325
Number of Sequences: 336
Number of extensions: 1913
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)