Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G21
         (797 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0356 + 28662956-28664043,28664255-28665139,28665227-286658...    29   5.7  
10_08_0756 + 20344406-20344590,20345811-20345880,20346229-203462...    28   7.5  
07_01_0495 + 3722319-3722517,3723325-3723482,3723652-3723929,372...    28   7.5  
04_01_0276 + 3658852-3660894                                           28   7.5  
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79...    28   9.9  

>01_06_0356 +
           28662956-28664043,28664255-28665139,28665227-28665840,
           28665929-28666338
          Length = 998

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = -2

Query: 592 IPMTPYQAPMTPPYG------VRTTEQSVHRSCGLEGSDLSTHRPFCSWLG 458
           I + P    +TPPY       +   ++ V    G+  S+ +   PFCSW+G
Sbjct: 12  ILLAPCATSLTPPYNNTDLAALLDFKEQVKDPNGILASNWTASAPFCSWIG 62


>10_08_0756 +
           20344406-20344590,20345811-20345880,20346229-20346291,
           20348390-20348521,20348604-20348737,20351245-20351323,
           20353050-20353111,20353211-20353310,20353448-20353489,
           20353605-20353646,20353959-20354150
          Length = 366

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +1

Query: 352 DEFKRHKK--CNKDEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVGEYLDPSLLDHMSDE 525
           D +K + K   N    +  + +  D  + LAK+++ L +++ K++GE L+   ++ +   
Sbjct: 201 DRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGL 260

Query: 526 QIVQLYELHK 555
           ++     LHK
Sbjct: 261 EMKLEKSLHK 270


>07_01_0495 +
           3722319-3722517,3723325-3723482,3723652-3723929,
           3723946-3724474
          Length = 387

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 7/64 (10%)
 Frame = +2

Query: 242 CHHPNMCRGFAGSTN*SSGFTGACRPNSVSWETTTPGTSSSD-------TKNVIRTRLRF 400
           C HP     +    N   G+T  C P +    T   G  S D        + +IRT+ +F
Sbjct: 71  CLHPKEYGCYGNCMNTPGGYTCVCPPGTSGNPTEMNGCHSKDKFTFVVKKRKLIRTKQKF 130

Query: 401 FSTN 412
           F  N
Sbjct: 131 FEQN 134


>04_01_0276 + 3658852-3660894
          Length = 680

 Score = 28.3 bits (60), Expect = 7.5
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +1

Query: 304 RGLPPELRVLGDNYARDEFKRHKKCNKDEAKIFLNEWTDYAINLAKQMKPLHQAKNKMVG 483
           RG  PE+  L   YAR+  K   +  +D+  I  + WTD+ I  A +      A+N   G
Sbjct: 605 RGHQPEIPRL--KYAREIAKIVLEREEDKKDILFDLWTDFLIYAANRCNRESHARNLNTG 662


>08_01_0107 -
           789217-789984,790070-790219,790303-790890,790968-791093
          Length = 543

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = -2

Query: 640 AFNATAHAARRRHGN*IPMTPYQAPMTPPYGVRTTEQSVHRSCGLEGS---DLSTHRPFC 470
           +++A++    R H +  P+TP  +   PP  VR+    V R  G  GS    L +HR   
Sbjct: 368 SYHASSSPMHRAHHH-SPVTPSPSKARPPIQVRSASPRVERGGGGGGSYTPSLHSHRHHA 426

Query: 469 S 467
           S
Sbjct: 427 S 427


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,659,730
Number of Sequences: 37544
Number of extensions: 452745
Number of successful extensions: 1340
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)