Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G21
         (797 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    26   1.6  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   3.6  
AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium transport...    24   4.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   6.3  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   6.3  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   8.3  

>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/20 (60%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +2

Query: 41  GSIQAAPDLCGTVVDG-KNN 97
           G ++AA D+C TV DG KNN
Sbjct: 99  GPMRAALDICRTVADGIKNN 118


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +3

Query: 291 LPGSPGLAARTPCPG 335
           +PG+PGLA R  C G
Sbjct: 170 VPGAPGLAGRDGCNG 184


>AF510719-1|AAP47148.1|  591|Anopheles gambiae ammonium
           transport-like protein protein.
          Length = 591

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 297 GSPGLAARTPCPG 335
           GSPG A+ TP PG
Sbjct: 8   GSPGAASTTPSPG 20


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 317 PNSVSWETTTPGTSSSDTKNV 379
           P+S S   TTP T+SS T +V
Sbjct: 280 PSSASSAMTTPATTSSPTGSV 300


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 317 PNSVSWETTTPGTSSSDTKNV 379
           P+S S   TTP T+SS T +V
Sbjct: 280 PSSASSAMTTPATTSSPTGSV 300


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +1

Query: 352 DEFKRHKKCNKDEAKIFLNEWTD-YA---INLAKQMKPLHQAKNKMVGEYLDPSLLDHMS 519
           DE KRH +  +++ +  LNE    YA     L +  + LHQ +  M  + L   LL   +
Sbjct: 708 DELKRHTQQRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHM--KKLQQELL--TN 763

Query: 520 DEQIVQL 540
           ++Q+ QL
Sbjct: 764 EQQLQQL 770


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 813,378
Number of Sequences: 2352
Number of extensions: 16498
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)