Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G09
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    22   4.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   5.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 287 QTQGFEDQSSMKFQILNLVRSIRTVTKIP 373
           +T  F   S  K+QILN + +     +IP
Sbjct: 364 ETDDFNGLSGTKYQILNAINAALKSDEIP 392


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +3

Query: 450 RKYKNLNSVIIRYFN 494
           R+Y+N+NS ++ + N
Sbjct: 231 REYENVNSTVVNWVN 245


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 195 IYLKQHCYVSTQYVYYTK 248
           + L +HC+    YVY +K
Sbjct: 154 VALLEHCFSMLNYVYSSK 171


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 390 ILSMMRGIFVTVLIDLTKL 334
           ++ M++  FVT+ + LTKL
Sbjct: 544 LVLMLKNRFVTLNVQLTKL 562


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,203
Number of Sequences: 336
Number of extensions: 1884
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)