Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G09
         (577 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0461 + 9577003-9577065,9577471-9577568,9578339-9578394,957...    55   4e-08
03_02_0890 + 12202056-12202152,12202527-12202765                       52   3e-07
03_02_0833 + 11624018-11624062,11624156-11624193,11624310-116243...    29   3.5  

>09_02_0461 +
           9577003-9577065,9577471-9577568,9578339-9578394,
           9578446-9578672,9578956-9579045
          Length = 177

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 29/75 (38%), Positives = 47/75 (62%)
 Frame = +2

Query: 188 LWNLFEATLLCLNAVCVLHEERFMQKIGWGANTQTQGFEDQSSMKFQILNLVRSIRTVTK 367
           LW L E  LL  NA+ +L+E+RF+   GW + ++  G     S+K QI+ L+ + + + +
Sbjct: 76  LWTLLEGFLLLANALAILNEDRFLGPRGW-SMSEVSGNGQTKSLKGQIVGLIYATQFL-R 133

Query: 368 IPLIILNILTIMFKL 412
           +PLI LN+L I+ KL
Sbjct: 134 MPLIALNVLIIVVKL 148


>03_02_0890 + 12202056-12202152,12202527-12202765
          Length = 111

 Score = 52.0 bits (119), Expect = 3e-07
 Identities = 27/77 (35%), Positives = 46/77 (59%)
 Frame = +2

Query: 191 WNLFEATLLCLNAVCVLHEERFMQKIGWGANTQTQGFEDQSSMKFQILNLVRSIRTVTKI 370
           W   E  L+  NA+ +L+E+RF+   GW + ++  G     S+K QI+ L+ + +   ++
Sbjct: 37  WPFLEGLLILANALAILNEDRFLAPRGW-SMSEVSGNGRSKSLKGQIVGLIYATQ-FFRM 94

Query: 371 PLIILNILTIMFKLLLG 421
           PLI LN+L I+ KL+ G
Sbjct: 95  PLIALNVLIIVVKLVSG 111


>03_02_0833 +
           11624018-11624062,11624156-11624193,11624310-11624376,
           11624770-11624887,11625361-11625507,11626178-11626221,
           11627739-11627861
          Length = 193

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 213 CYVSTQYVYYTKKDSCRKLAGEQIPKPRALK 305
           C +   +VY T   +C  LA E+IP P+  K
Sbjct: 84  CDLYVTFVYGTPTSNCLSLAREEIPGPKGYK 114


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,019,777
Number of Sequences: 37544
Number of extensions: 166528
Number of successful extensions: 328
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 326
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)