Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G09
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82080-6|CAE45090.1|   80|Caenorhabditis elegans Hypothetical pr...    77   1e-14
Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z82080-6|CAE45090.1|   80|Caenorhabditis elegans Hypothetical
           protein W09G3.8 protein.
          Length = 80

 Score = 76.6 bits (180), Expect = 1e-14
 Identities = 35/80 (43%), Positives = 59/80 (73%)
 Frame = +2

Query: 182 LTLWNLFEATLLCLNAVCVLHEERFMQKIGWGANTQTQGFEDQSSMKFQILNLVRSIRTV 361
           L+ + L EA LL LN + +LH ERF++K G GA + +  F+  +S+K Q+++L+ +++TV
Sbjct: 3   LSFYALLEAALLVLNGIAILHRERFLKKYGLGAPSHS--FDGSNSVKDQLVSLIFAVQTV 60

Query: 362 TKIPLIILNILTIMFKLLLG 421
            ++PLI +NI+ I+FKL+LG
Sbjct: 61  MRMPLIAINIVVIVFKLILG 80


>Z75537-1|CAA99834.1|  455|Caenorhabditis elegans Hypothetical
           protein F18E2.1 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 306 SSKPWVWVFAPQPIFCMNLSS 244
           ++ PW++ F  +P +C N++S
Sbjct: 262 AAHPWIFTFQHRPFYCSNVNS 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,246,939
Number of Sequences: 27780
Number of extensions: 162641
Number of successful extensions: 346
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)