Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_G01
         (347 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0409 - 20503480-20503678,20504522-20504717,20504805-205048...    73   5e-14
05_02_0095 + 6564703-6564705,6564848-6564955,6565153-6565195,656...    73   5e-14
02_02_0196 + 7685933-7685961,7686086-7686284                           73   5e-14
01_01_0745 + 5769150-5769152,5769268-5769375,5769812-5769854,576...    73   5e-14
02_02_0195 + 7676014-7676094,7676111-7676218,7676307-7676349,767...    36   0.012
09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468           27   4.0  

>06_03_0409 -
           20503480-20503678,20504522-20504717,20504805-20504847,
           20505632-20505739,20505848-20505850
          Length = 182

 Score = 73.3 bits (172), Expect = 5e-14
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +2

Query: 56  PQLEFIGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 211
           P     G+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 120 PSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 1   GNFGFGIQEHIDLGIKYDPSIGIY 72
           G FGFGIQEHIDLGIKYDPS GIY
Sbjct: 102 GCFGFGIQEHIDLGIKYDPSTGIY 125


>05_02_0095 +
           6564703-6564705,6564848-6564955,6565153-6565195,
           6565303-6565409,6566310-6566395,6566396-6566594
          Length = 181

 Score = 73.3 bits (172), Expect = 5e-14
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +2

Query: 56  PQLEFIGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 211
           P     G+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 119 PSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 170


>02_02_0196 + 7685933-7685961,7686086-7686284
          Length = 75

 Score = 73.3 bits (172), Expect = 5e-14
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +2

Query: 56  PQLEFIGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 211
           P     G+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 13  PSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 64


>01_01_0745 +
           5769150-5769152,5769268-5769375,5769812-5769854,
           5769945-5770140,5770836-5771034
          Length = 182

 Score = 73.3 bits (172), Expect = 5e-14
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +2

Query: 56  PQLEFIGLDFYVVLGRPGFNVAHRRRKTGKVGFPHRLTKEDAMKWFQQKYDG 211
           P     G+DFYVVL R G+ VA RRR   +VG  HR+TKEDAMKWFQ KY+G
Sbjct: 120 PSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEG 171



 Score = 51.6 bits (118), Expect = 2e-07
 Identities = 22/24 (91%), Positives = 22/24 (91%)
 Frame = +1

Query: 1   GNFGFGIQEHIDLGIKYDPSIGIY 72
           G FGFGIQEHIDLGIKYDPS GIY
Sbjct: 102 GCFGFGIQEHIDLGIKYDPSTGIY 125


>02_02_0195 +
           7676014-7676094,7676111-7676218,7676307-7676349,
           7676449-7676648
          Length = 143

 Score = 35.5 bits (78), Expect = 0.012
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = +1

Query: 1   GNFGFGIQEHIDLGIK 48
           G FGFGIQEHIDLGIK
Sbjct: 128 GCFGFGIQEHIDLGIK 143


>09_02_0371 + 8064616-8065683,8066194-8068318,8068425-8068468
          Length = 1078

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = +2

Query: 41  VSSTIPQLEFIGLDFYVVLGRPGFNVAHRRRKTGKVGFP--HRLTKEDAMKW 190
           V +  PQ+E +G DF+V   + G      R  +  V FP  H L  +  +KW
Sbjct: 829 VINRAPQIEQVGYDFFV---QGGQRKTDNRNPSHAVFFPKLHELCLQGMIKW 877


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,520,284
Number of Sequences: 37544
Number of extensions: 151318
Number of successful extensions: 396
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 396
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)