Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_F23
         (770 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.7  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   6.2  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   8.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.2  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = +1

Query: 295 LKFVCNWNSAPSG--KRSNCT 351
           L+  CNW+S P+   + S CT
Sbjct: 14  LQLECNWSSGPNATLQSSACT 34


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 18/71 (25%), Positives = 29/71 (40%)
 Frame = +3

Query: 462 QESFRYIARIH*KYKTIICIVKQIGKIHHNICI*KSDIILNVAHLFNYGTLYLLMNIIKS 641
           Q+SF+YI R       I+  V  I  +   + I  S +I N     +    +  ++  K 
Sbjct: 2   QDSFQYINRSELITSKIVSFVNSIFLVMSAVTIILSSLIFNQEQWSSLNKNFQFID--KK 59

Query: 642 CNRVNSVQKFF 674
            N  NS  + F
Sbjct: 60  LNNRNSKSRVF 70


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -3

Query: 507 FYISNVFVLCT*NSLVALDVIVSENIIVISLVQRAKSEFFNI 382
           FY +  FV+     L  LD IV+  I++I       S   N+
Sbjct: 319 FYAARFFVINRGTILGILDAIVTFLIVMIQFEMTQNSTNINL 360


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -3

Query: 507 FYISNVFVLCT*NSLVALDVIVSENIIVISLVQRAKSEFFNILDS 373
           FY +  FV+     L  LD IV+  I++I       S   N + +
Sbjct: 319 FYAARFFVINRGTILGILDAIVTFLIVMIQFEMTQNSTNINFVST 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,936
Number of Sequences: 336
Number of extensions: 3180
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)