Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F22
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 363 e-100
SB_56| Best HMM Match : Actin (HMM E-Value=0) 363 e-100
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 363 e-100
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 362 e-100
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 268 4e-72
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 203 1e-52
SB_54| Best HMM Match : Actin (HMM E-Value=0) 202 2e-52
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 194 6e-50
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 184 7e-47
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 169 2e-42
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 105 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 72 6e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 64 1e-10
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 46 4e-05
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.003
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5) 31 0.96
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 1.3
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 1.7
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 30 2.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 2.9
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 29 3.9
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 29 3.9
SB_55729| Best HMM Match : YajC (HMM E-Value=0.56) 29 5.1
SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 29 5.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 6.8
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.8
SB_31707| Best HMM Match : Extensin_2 (HMM E-Value=0.19) 28 9.0
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 9.0
SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6) 28 9.0
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 9.0
SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7) 28 9.0
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 9.0
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 363 bits (892), Expect = e-100
Identities = 170/174 (97%), Positives = 173/174 (99%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 389
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 390 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 569
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 570 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKEKL
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 216
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 363 bits (892), Expect = e-100
Identities = 170/174 (97%), Positives = 173/174 (99%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 389
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 102
Query: 390 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 569
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 103 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 162
Query: 570 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKEKL
Sbjct: 163 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 216
Score = 88.6 bits (210), Expect = 5e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 363 bits (892), Expect = e-100
Identities = 170/174 (97%), Positives = 173/174 (99%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 389
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 390 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 569
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 570 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKEKL
Sbjct: 164 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Score = 97.5 bits (232), Expect = 1e-20
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 362 bits (890), Expect = e-100
Identities = 169/174 (97%), Positives = 173/174 (99%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 389
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 390 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 569
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHT 163
Query: 570 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
VPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKEKL
Sbjct: 164 VPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 217
Score = 90.2 bits (214), Expect = 1e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 268 bits (656), Expect = 4e-72
Identities = 125/130 (96%), Positives = 128/130 (98%), Gaps = 2/130 (1%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHP 389
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 44 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 103
Query: 390 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT 569
VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHT
Sbjct: 104 VLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHT 163
Query: 570 VPIYE--GYA 593
VPIYE GY+
Sbjct: 164 VPIYEERGYS 173
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +2
Query: 80 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 203 bits (496), Expect = 1e-52
Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
Frame = +3
Query: 231 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 407
KD VGDEA R +L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 408 PLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 587
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 588 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
+ALPH RLD+AGRD+T YL+K++ RGY+F TA E VR +KEKL
Sbjct: 173 FALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKL 220
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 98 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 196
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 202 bits (493), Expect = 2e-52
Identities = 91/133 (68%), Positives = 112/133 (84%)
Frame = +3
Query: 333 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 512
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 513 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 692
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 693 AXREIVRDIKEKL 731
A ++I+RD+KE L
Sbjct: 2249 AEQQIIRDLKETL 2261
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +2
Query: 47 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 205
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 194 bits (473), Expect = 6e-50
Identities = 93/102 (91%), Positives = 98/102 (96%)
Frame = +3
Query: 426 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 605
N + M +IMFETFNSPAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 606 ILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
I+RLDLAGRDLTDYLMKILTERGYSFTTTA REIVRDIKEKL
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 179
Score = 98.7 bits (235), Expect = 4e-21
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +3
Query: 210 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 353
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 43 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +2
Query: 86 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 208
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 184 bits (448), Expect = 7e-47
Identities = 87/95 (91%), Positives = 91/95 (95%)
Frame = +3
Query: 447 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 626
IMFE FNSPA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 627 GRDLTDYLMKILTERGYSFTTTAXREIVRDIKEKL 731
GRDLTDYLMK++TERGYSFTTTA REIVRDIKEKL
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKL 95
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 169 bits (411), Expect = 2e-42
Identities = 73/116 (62%), Positives = 100/116 (86%)
Frame = +3
Query: 381 EHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 560
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 561 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAXREIVRDIKEK 728
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++ EIVR IKE+
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE 241
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 105 bits (253), Expect = 3e-23
Identities = 48/126 (38%), Positives = 80/126 (63%)
Frame = +3
Query: 291 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 470
PI+ G+I +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 471 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 650
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 651 MKILTE 668
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 71.7 bits (168), Expect = 6e-13
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Frame = +3
Query: 492 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 668
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 669 RGYSFTTTAXREIVRDIKEKL 731
RG++FT+++ +IV DIKEK+
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKI 847
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/64 (39%), Positives = 38/64 (59%)
Frame = +2
Query: 8 PMTRSLAAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 187
P+T A IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++V
Sbjct: 672 PITLCTAFATVIPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVV 730
Query: 188 GRPR 199
G P+
Sbjct: 731 GNPQ 734
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 64.1 bits (149), Expect = 1e-10
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 8/89 (8%)
Frame = +3
Query: 486 AIQAVLSLYASG-------RT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 641
A +AVL+L AS RT TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 40 ATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
Query: 642 DYLMKILTERGYSFTTTAXREIVRDIKEK 728
++ ++L ER E + IKE+
Sbjct: 100 FFVQQLLREREMGIPPEQSMETAKTIKER 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 3e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +2
Query: 104 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 205
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 3e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 219 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 398
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 528 TGIVLDSGDGVSHTVPI 578
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 1e-06
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -1
Query: 202 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 86
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 45.6 bits (103), Expect = 4e-05
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Frame = +3
Query: 126 ACARPVSPATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRGILTLKY--PIE 299
AC++ + A+ + AP S P+ + A ++ ++GD+ + + L Y P +
Sbjct: 242 ACSQKIGFASNQ-APRSIPNAIFKAKSE------RRKLFIGDQIEECKDYSALFYVLPFQ 294
Query: 300 HGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAM 479
G + NWD ++IW +TF E + M +I+FE +N A+
Sbjct: 295 KGFLVNWDVEKQIWDYTFGKE--------------------GLEDAMDEILFEEYNFKAL 334
Query: 480 YVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 614
A LS Y S +V+D+G +H VP++ G + A+ R
Sbjct: 335 SRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKVIKKAVRR 385
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 95 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 211
+A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 336 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYA 515
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 516 SGRTTGIV 539
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.55
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 282 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 434
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_49803| Best HMM Match : S-antigen (HMM E-Value=3.5)
Length = 257
Score = 31.1 bits (67), Expect = 0.96
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 4/70 (5%)
Frame = -3
Query: 704 FPXSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGV----GDTISGVEH 537
F SG + D H++ + +TS V+ + G + D + T S E
Sbjct: 134 FGISGTANTEEQIDVDKHQITNKASTSSVEKANTAGTTGGTQDQHATQGNKASTCSFEEA 193
Query: 536 DTGGTTGGVQ 507
+T GTTGG Q
Sbjct: 194 NTAGTTGGTQ 203
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 423 ANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 539
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -3
Query: 668 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYGVGDTISGVEHDTGG 525
L E + +V Q + GV S G+G G TISG D+GG
Sbjct: 1474 LQEAMMPIVSQQTCAAAMRRWGVVTSRMICGGFGAGSTISGCFGDSGG 1521
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 179
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -3
Query: 443 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLLHVIPVGDDTVLDGVLQSEDTSL 264
G +L V LG+ GFG V G + + GV+P L+ I + D ++ + +D SL
Sbjct: 157 GGILAVALGILAGFGLAMAV---GTPFISLAGVLPFLILGIGIDDMFIIINEMDRQDNSL 213
Query: 263 AL 258
++
Sbjct: 214 SV 215
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 628 PAKSRRRMAWGRA*PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNM 449
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 448 IWVIFSLLALGLR 410
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 66 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +2
Query: 164 RAVFPSIV----GRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHR 298
R+V PS V G R + R PER +G ++ER HSE P R
Sbjct: 988 RSVSPSAVKRTKGSKRSESRSVSRSPERDRKGRDSAKKERQSHSESPQR 1036
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 29.1 bits (62), Expect = 3.9
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -1
Query: 568 VWE--TPSPESSTIPVVRPE-------AYSESTAWMATYMAGELKVSNMIWVIFSLLALG 416
VWE T P + T+P + + Y S +W+ L N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 415 LRGASVSSTGCSSGATRSSL*KVWCQIFSMSSQLVMIPCSMGYFRVRIPLLLWAS 251
L A + T C T +L ++ ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 27 LP*SQYQRPQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
LP + P T S C +L+R T+ APA P SPAT P R
Sbjct: 397 LPADRRSEPLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
>SB_55729| Best HMM Match : YajC (HMM E-Value=0.56)
Length = 654
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -3
Query: 611 EDGVGQSVTFVDGYGVGDTISGVEHDTGGTTGG 513
+DG G VDG GVGD G + D G GG
Sbjct: 9 DDGDGGGDDGVDGGGVGDDGDGDDSDCGDDGGG 41
>SB_21643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1974
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 426 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVP 575
NR + +++ E S ++ + +L+LY RT D+ + HT P
Sbjct: 437 NRVEFVKLLLENGVSMGQFLTPERLLALYRGVRTCNATPDNNNRACHTTP 486
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +3
Query: 147 PATTRPAPSSRPSWVALATRXVMVGMGQKDSYVGDEAQSKRG-ILTLKYPIEHGIITNW- 320
P P SRP V L+ V V ++ G + K+ ++TL + I G+ +
Sbjct: 429 PWAPEPENFSRP--VTLSQNVVSVTGREESGGSGTQVCRKKAPLITLSHVIRMGLALSLV 486
Query: 321 -DDMEKIWHHTFYN 359
D EK+W+HT N
Sbjct: 487 SDVKEKVWYHTCPN 500
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 252 RHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPALHMPEP 118
RH R LS Y P W + G T R PAKP+L++P P
Sbjct: 520 RHYNR-LSNQY----PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 411 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIV 539
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 60 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 185
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 75 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 179
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 264 CSGPRHPRRSLSGPYRPSRPWWRGRPTMDGKTARGASSPAKPAL 133
C+ P S GP R S P RG PT +RG +P K A+
Sbjct: 1301 CTTPHRSSASF-GPNRVSTPK-RGSPTSRNTPSRGLRTPVKTAM 1342
>SB_31707| Best HMM Match : Extensin_2 (HMM E-Value=0.19)
Length = 309
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/102 (24%), Positives = 33/102 (32%)
Frame = +2
Query: 8 PMTRSLAAVESIPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 187
P+ + P H K K D + A +VD + G G +P P
Sbjct: 131 PIPEQFRFMTQQPTKKKHKHKKHKSQDGERAKSLVDT---VIATGLPGQPSPEYPHPYPP 187
Query: 188 GRPRHQGRDGRYGPERLLRG*RGPEQERYPHSEVPHRARYHH 313
RP + PE P + YPH P R Y H
Sbjct: 188 LRPEYAHPYPPRRPEYAHL--YPPRRPEYPHPYPPRRPEYAH 227
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_41430| Best HMM Match : SSXT (HMM E-Value=7.6)
Length = 188
Score = 27.9 bits (59), Expect = 9.0
Identities = 22/79 (27%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = -1
Query: 577 MGTVWETPSPESSTIPVVRPEAYSESTAWMATYMAGELK-VSNMIWVIFSLLALGLRGAS 401
M + + PSP P+A+ + A Y +G LK S V + L+ G G
Sbjct: 1 MAELADLPSPRMDWSSTDLPQAFKKFRATCELYFSGPLKEKSEPDKVSYLLIWTGDEGIE 60
Query: 400 VSSTGCSSGATRSSL*KVW 344
+SST S L W
Sbjct: 61 LSSTWALSADDSKKLDTYW 79
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_33220| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 590
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/53 (32%), Positives = 21/53 (39%)
Frame = +2
Query: 554 WCLPHRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*XGNRS 712
WC H+ R PR P G WS PH++ + L H H G S
Sbjct: 352 WCAKHQ---ERSHQQPRQPDQGQSWS-----PHKE-YNVTFLHHRHHPTGQSS 395
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 75 SRCATTMLLR-L*STMAPACARPVSPAT 155
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,395,452
Number of Sequences: 59808
Number of extensions: 493039
Number of successful extensions: 1784
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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