Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_F17
         (808 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   2.9  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.0  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.0  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.6  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 198 VPVPHDIPQAPGKPEENATAVQPTKQNTT 284
           VP P   P    + E    + QPT+ +TT
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTT 424


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 201 PVPHDIPQAPGKPEENATAVQPTKQNTTS 287
           PVP  + +   KP        P++  TT+
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 101 IKLIFNKNKQLNK*DLFSVDNALL 30
           +KL+ NK  ++    LFS+DNALL
Sbjct: 248 LKLMQNK-LEITACRLFSIDNALL 270


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 698 SQETKGQNDSTNKAWSIK 645
           SQ T+G+ND+  +A  +K
Sbjct: 49  SQSTEGENDARPRASQVK 66


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 16/65 (24%), Positives = 24/65 (36%)
 Frame = +3

Query: 150 CIALLAEQSGAQLGTTVPVPHDIPQAPGKPEENATAVQPTKQNTTSAXXXXXXXXXXXPE 329
           CI +LAE  G+ + T + +P  +  A  K       V  T Q                P 
Sbjct: 506 CINVLAEACGSDITTRLLLPTVLSMANDKVANVRFNVAKTLQKIAPQLDQAVIQPQVKPV 565

Query: 330 AEKVT 344
            +K+T
Sbjct: 566 LDKLT 570


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,754
Number of Sequences: 336
Number of extensions: 2970
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)