Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F16
(462 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical p... 74 4e-14
U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon ge... 32 0.17
AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein. 32 0.17
Z82076-2|CAB04938.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.53
AF002198-8|AAF99931.2| 300|Caenorhabditis elegans Serpentine re... 27 4.9
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 27 8.6
AL110477-6|CAB54330.1| 265|Caenorhabditis elegans Hypothetical ... 27 8.6
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 27 8.6
AC006674-13|AAF39942.1| 281|Caenorhabditis elegans Hypothetical... 27 8.6
>Z99281-56|CAB16513.1| 131|Caenorhabditis elegans Hypothetical
protein Y57G11C.12b protein.
Length = 131
Score = 74.1 bits (174), Expect = 4e-14
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Frame = +1
Query: 13 KTVKPVLSSSHAEARNXVLSLYKAWYRQIPYIVKDYDIPKSEAQC-REKLKELFIKNKHV 189
+TV P+ S++ AEAR VL+ YK + R P D+ + R +K+ F KN H+
Sbjct: 17 RTVAPIKSNNSAEARMSVLAAYKEFQRLTPKFWWDFGLHDMPLGVFRAVIKKQFTKNGHL 76
Query: 190 TDIRVIDMLVIKGQMELKESVNIWKQKGHIMAY-FKPTEEPKPKNFLSKFFSGNE 351
TD+RV+D LV + +K + H+ Y F E KPK+FLSKF +G E
Sbjct: 77 TDVRVVDRLVGETHQHMKSIRYAFYNPDHVRNYLFAENVEAKPKDFLSKFLNGKE 131
>U10402-9|AAA19065.1| 892|Caenorhabditis elegans Gro-1 operon gene
protein 1 protein.
Length = 892
Score = 32.3 bits (70), Expect = 0.17
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -1
Query: 270 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 106
+LF + L+ L+N H+N S ISH F L N+E + FL TL F L I +
Sbjct: 99 ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 157
Query: 105 IGDLT 91
+ T
Sbjct: 158 FNETT 162
>AY052769-1|AAL14108.1| 885|Caenorhabditis elegans GOP-1 protein.
Length = 885
Score = 32.3 bits (70), Expect = 0.17
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -1
Query: 270 LLFPYVHRLFQLHLTLNNQHINDSNISHMFVL-NEE----FFQFLSTLCF*LGNVIILHY 106
+LF + L+ L+N H+N S ISH F L N+E + FL TL F L I +
Sbjct: 92 ILFENIRHETSLYFLLSNNHVN-SIISHKFDLQNDEIMAYYISFLKTLSFKLNPATIHFF 150
Query: 105 IGDLT 91
+ T
Sbjct: 151 FNETT 155
>Z82076-2|CAB04938.1| 360|Caenorhabditis elegans Hypothetical
protein W07G1.6 protein.
Length = 360
Score = 30.7 bits (66), Expect = 0.53
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Frame = -1
Query: 414 LIYSLLRFNNFKLCTK*IYKSFISRKEFRKEI---FWFRFFCWFEVGHNVPLLFPYVHRL 244
++Y LL F + + S+ RK F K + F F F WFE + L++PY + L
Sbjct: 33 VVYLLLLFISAYFTVILVMTSWRIRK-FHKNMTICFSFYFGAWFECWLGLVLVWPYKNGL 91
Query: 243 F---QLHLTLNNQHINDSNISHMFVLNEEFFQFLSTLCF*LGNVIILHYI 103
H+ N +D I ++ T C G+ +I HY+
Sbjct: 92 VLVEDTHMKFTNFETSDRTIM------AHITKYPETTCLLFGSFLIWHYL 135
>AF002198-8|AAF99931.2| 300|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 3 protein.
Length = 300
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -2
Query: 284 AIMCPFCFHMFTDSFNSI*PLITSISMTRISVTCLFL 174
AI P FH + DS+ SI L+ +IS++ ++L
Sbjct: 115 AIYTPIMFHKYRDSYPSIIILMLAISLSMFENLLMYL 151
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 291 EVGHNVPLLFPYVHRLFQ 238
E GHNV L P +HR ++
Sbjct: 49 EAGHNVTFLMPIIHREYE 66
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 291 EVGHNVPLLFPYVHRLFQ 238
E GHNV L P +HR ++
Sbjct: 49 EAGHNVTFLMPIIHREYE 66
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 151 EKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQ 267
E K L++ +HV+ + D LV KG++ KE+ ++Q
Sbjct: 114 ENKKYLYLLLEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 151 EKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQ 267
E K L++ +HV+ + D LV KG++ KE+ ++Q
Sbjct: 114 ENKKYLYLLLEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>AL110477-6|CAB54330.1| 265|Caenorhabditis elegans Hypothetical
protein Y113G7B.8 protein.
Length = 265
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 139 LLTWECHNPSLYRGSDDTMLCKDLER 62
L +WEC + L SDDT K ++R
Sbjct: 118 LSSWECKSAILRSASDDTWFQKTIDR 143
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 151 EKLKELFIKNKHVTDIRVIDMLVIKGQMELKESVNIWKQ 267
E K L++ +HV+ + D LV KG++ KE+ ++Q
Sbjct: 114 ENKKYLYLLLEHVSGGELFDYLVRKGRLMSKEARKFFRQ 152
>AC006674-13|AAF39942.1| 281|Caenorhabditis elegans Hypothetical
protein K12H6.7 protein.
Length = 281
Score = 26.6 bits (56), Expect = 8.6
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 295 PTEEPKPKNFLSKFFSGNE*FVYLLCTKLEI 387
P E PK NF+S FF N VY T ++I
Sbjct: 227 PAERPKEFNFVSTFFPENFNKVYDCSTWMDI 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,320,808
Number of Sequences: 27780
Number of extensions: 192833
Number of successful extensions: 569
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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