Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P10_F_F14
         (447 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC129820-1|AAI29821.1|  414|Homo sapiens FLJ36144 protein protein.     31   2.4  
AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AK093463-1|BAC04173.1|  650|Homo sapiens protein ( Homo sapiens ...    31   2.4  
AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel alpha2-...    29   9.5  
AJ272213-1|CAB75878.1|  519|Homo sapiens calcium channel alpha2-...    29   9.5  
AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium c...    29   9.5  

>BC129820-1|AAI29821.1|  414|Homo sapiens FLJ36144 protein protein.
          Length = 414

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 200 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 69
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 353 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 397


>AK128822-1|BAC87623.1|  555|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46108 fis, clone TESTI2030519. ).
          Length = 555

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 200 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 69
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 494 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 538


>AK093463-1|BAC04173.1|  650|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36144 fis, clone TESTI2025022, weakly similar to
           TRICHOHYALIN. ).
          Length = 650

 Score = 30.7 bits (66), Expect = 2.4
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -2

Query: 200 GFIVPAGHSAGDGSPLSTPAGCE-SELGFGHYEASQXQGIES*IC 69
           G + PAG  AG+GSP   P   E  +L  G   A Q  G+ S  C
Sbjct: 589 GSVEPAGGEAGEGSPQDNPTAQEIMQLFCGMKNAQQCPGLGSTSC 633


>AJ272268-1|CAB75962.1|  997|Homo sapiens calcium channel
           alpha2-delta3 subunit protein.
          Length = 997

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 23  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 172
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 410 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 456


>AJ272213-1|CAB75878.1|  519|Homo sapiens calcium channel
           alpha2-delta3 subunit protein.
          Length = 519

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 23  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 172
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 404 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 450


>AF516696-1|AAN06673.1| 1091|Homo sapiens voltage-gated calcium
           channel alpha(2)delta-3 subunit protein.
          Length = 1091

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +2

Query: 23  VAVSKSLKELPQPKMYKFTILFLXFGLLHNGRSPTHFHIQLGWKEGCHRR 172
           V V + LK +P+   YK  I    F + +NG   TH  ++L ++EG  RR
Sbjct: 504 VPVKELLKTIPK---YKLGIHGYAFAITNNGYILTHPELRLLYEEGKKRR 550


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,220,323
Number of Sequences: 237096
Number of extensions: 1312325
Number of successful extensions: 2644
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2644
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)