BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F11
(744 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 30 0.066
AY745208-1|AAU93475.1| 103|Anopheles gambiae cytochrome P450 pr... 25 3.3
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
structural protein protein.
Length = 1645
Score = 30.3 bits (65), Expect = 0.066
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 20 QLPSVVIGGSLTNKMSSKVSRDTLYECVNAVLQSSKDKKRNFLET 154
Q PS+ GG++ K+ +K SRD + +N + + + + F ET
Sbjct: 1382 QQPSLTTGGAVPFKLLTKKSRDQALKAINFIEREQQQEMEIFEET 1426
>AY745208-1|AAU93475.1| 103|Anopheles gambiae cytochrome P450
protein.
Length = 103
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 616 FHQLPCVTAQETLAECPIIAYEINDGTT 699
FH +P + TLA+C + Y + TT
Sbjct: 10 FHIVPVSGPRRTLADCSLGGYRVPKDTT 37
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,603
Number of Sequences: 2352
Number of extensions: 16098
Number of successful extensions: 22
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -