Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P10_F_F09
(775 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0408 + 17352110-17352619,17352709-17352834,17353036-173532... 213 1e-55
11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378... 204 5e-53
08_02_0992 + 23380855-23381195,23382464-23382506,23383306-233833... 184 7e-47
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 111 6e-25
01_03_0076 - 12241408-12241545,12241719-12241790,12242173-122422... 51 9e-07
11_04_0318 + 16336356-16336358,16337254-16337484,16337580-163376... 48 6e-06
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 46 4e-05
04_03_0866 + 20407242-20407575,20407665-20407724,20408298-204083... 44 2e-04
05_05_0018 - 21547649-21547875,21547973-21548187,21548831-215490... 41 0.001
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 40 0.002
03_03_0266 - 16014740-16015045,16015566-16015601,16015623-160156... 34 0.11
03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495 30 1.8
01_02_0089 - 10997882-10997957,10998139-10998423,10998519-109985... 29 4.1
06_01_0498 + 3570543-3571136,3579620-3580348 29 5.4
03_06_0523 + 34499533-34499705,34499808-34499917,34500037-345002... 29 5.4
06_03_0956 + 26296744-26297382,26297595-26297669,26298147-262983... 28 9.5
02_04_0256 + 21331396-21332268 28 9.5
>09_04_0408 +
17352110-17352619,17352709-17352834,17353036-17353209,
17353669-17353830,17353998-17354140,17354835-17354910,
17355445-17355589,17355847-17355896,17356001-17356078,
17357153-17357314,17357406-17357669,17357929-17358033,
17358158-17358247,17358344-17358346
Length = 695
Score = 213 bits (521), Expect = 1e-55
Identities = 97/191 (50%), Positives = 132/191 (69%), Gaps = 2/191 (1%)
Frame = +2
Query: 206 EDRDGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILN 385
E +DGIR WNV P +R +A VVP++ +Y PLK+ PD+P + Y P+ C CR+ILN
Sbjct: 8 EAQDGIRMPWNVIPGTREDALSCVVPISAIYTPLKQVPDIPVLPYSPLRC--RMCRSILN 65
Query: 386 PMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEY--TITRAQAMPP 559
P VDY AK+WVC FCFQRN FP Y++ISE + PAEL P ++T+EY T +PP
Sbjct: 66 PFSIVDYVAKIWVCPFCFQRNHFPQHYSSISESNLPAELFPQYTTVEYISTAETGPVVPP 125
Query: 560 IYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHELGTEGISKCYVF 739
+++ VVDTC+ EEE+G LK +L + L+P N+LVG ITFG VQ+HELG + K YVF
Sbjct: 126 VFMFVVDTCMIEEEIGYLKSALAQVVELLPDNSLVGFITFGTYVQVHELGFGLLPKSYVF 185
Query: 740 KGTKDLSXKQI 772
KGTK+++ ++
Sbjct: 186 KGTKEVTKDEM 196
>11_04_0096 +
13435988-13436803,13436880-13437053,13437673-13437834,
13438548-13438690,13439059-13439134,13439231-13439403,
13439482-13439563,13439949-13440026,13440369-13440461,
13441026-13441187,13441225-13441530,13442265-13442369,
13443097-13443243
Length = 838
Score = 204 bits (499), Expect = 5e-53
Identities = 96/202 (47%), Positives = 133/202 (65%), Gaps = 16/202 (7%)
Frame = +2
Query: 215 DGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDL--PPIQYEPVLCTRNTCRAILNP 388
D +R TWN WP S++EA+R VVPLA P++ L PP+ Y P+ C + C A+LNP
Sbjct: 19 DAVRLTWNAWPRSKVEASRCVVPLAAAISPVRSPESLASPPLPYPPLRC-KPPCSALLNP 77
Query: 389 MCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYTITRAQAM----- 553
+VD+ AK+W+C CF RN FPP YAAISE + PAEL P ST+EY + A
Sbjct: 78 FARVDFAAKIWICPLCFSRNHFPPHYAAISESNVPAELFPQCSTVEYLLAGAAPAAGVPL 137
Query: 554 ---------PPIYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHEL 706
PP++L V+DTC+ EEEL +K S++ +++L+P++ALVGL+TFG V +HEL
Sbjct: 138 HQGGPPAPPPPVFLFVIDTCVIEEELEYVKMSMRKAVALLPEHALVGLVTFGTQVHLHEL 197
Query: 707 GTEGISKCYVFKGTKDLSXKQI 772
G +SK YVF+GTK++S +QI
Sbjct: 198 GFSDLSKIYVFRGTKEISKEQI 219
>08_02_0992 +
23380855-23381195,23382464-23382506,23383306-23383371,
23384228-23384428,23384450-23384707,23384798-23385013,
23385148-23385321,23386151-23386312,23386594-23386635
Length = 500
Score = 184 bits (448), Expect = 7e-47
Identities = 88/188 (46%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Frame = +2
Query: 215 DGIRFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMC 394
DGIR WNV P ++ +A VVP++ +Y PL+ P +P + Y P+ C CR+ILNP C
Sbjct: 151 DGIRMPWNVIPGTKQDAANCVVPVSAIYTPLRPNPAIPVLPYGPLRC--RMCRSILNPFC 208
Query: 395 QVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEY--TITRAQAMPPIYL 568
VDY AK+W RN FP Y++ISE + PAEL P ++T+E+ T +PP++L
Sbjct: 209 VVDYVAKIW-------RNHFPQHYSSISESNLPAELFPQYTTVEFMSTAETGPVVPPVFL 261
Query: 569 LVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHELGTEGISKCYVFKGT 748
VVDTC+ EEE+ LK +L ++ L+P +LVG ITFG VQ+HELG + K YVFKGT
Sbjct: 262 FVVDTCMIEEEIDYLKSALAQAIELLPDQSLVGFITFGTYVQVHELGFGLLPKSYVFKGT 321
Query: 749 KDLSXKQI 772
K+++ QI
Sbjct: 322 KEVTKDQI 329
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 111 bits (267), Expect = 6e-25
Identities = 68/200 (34%), Positives = 98/200 (49%), Gaps = 13/200 (6%)
Frame = +2
Query: 215 DGIRFTWNVWPSSRIEATRLVVPLACLYQPLKER-PDLPPI-QYEPVLCTRNT----CRA 376
+G+R+ W+ WP + A LVVP + L PL PDL P+ Y P+ C C A
Sbjct: 10 EGLRWPWHAWPPTASAAASLVVPTSVLCTPLHPAAPDLLPLLPYAPLRCGGGGGGGGCGA 69
Query: 377 ILNPMCQVDYRAKLWVCNFC-FQRNPFPPQYAAISEQHQPAELIPNFSTIEYTITRAQAM 553
LNP +V + W C FC NPFP ++ PAEL P S++EY + A
Sbjct: 70 ALNPFSRVHHATARWACPFCGASANPFP---RLLAPDALPAELFPTHSSVEYALPPDAAE 126
Query: 554 ------PPIYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHELGTE 715
PP + VVD EL ALK + + +P+ V L++F V +H+LG E
Sbjct: 127 AGGGPGPPSVVFVVDAATSGPELAALKAEVLRVVQGLPEGVRVALVSFAASVWVHDLGFE 186
Query: 716 GISKCYVFKGTKDLSXKQIQ 775
G ++ V G ++L ++IQ
Sbjct: 187 GCTRVVVMNGERELESEKIQ 206
>01_03_0076 -
12241408-12241545,12241719-12241790,12242173-12242289,
12243307-12245127,12245361-12245810
Length = 865
Score = 51.2 bits (117), Expect = 9e-07
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Frame = +2
Query: 293 LYQPLKE-RPDLPPIQYEPVLCTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYA 469
L P +E P ++ +P C C A +N C V + W C C + N ++
Sbjct: 168 LVSPGREVAPGPETVERDPRRCLN--CGAYVNLYCDVLIGSGQWQCVICKKMNGSEGEFV 225
Query: 470 AISEQHQPAELIPNF--STIEYTIT---RAQAMP--------PIYLLVVDTCLDEEELGA 610
+S +H + P S I+Y + R +P PI++L+ D CLDE L
Sbjct: 226 -VSSKHDLLQW-PELASSAIDYVQSGNRRPSFVPVPDTRVSGPIFILI-DECLDEAHLQH 282
Query: 611 LKDSLQTSLSLMPQNALVGLITFGKMVQIHELGTEGISKCYVFKGTKDLSXKQIQ 775
L+ SL + +P A +G+I++G+ V +++ V G K + + ++
Sbjct: 283 LQGSLHAFVDTLPPTARIGIISYGRTVSVYDFSEGAAVSADVLPGNKSPTHESLK 337
>11_04_0318 +
16336356-16336358,16337254-16337484,16337580-16337654,
16337741-16337839,16339010-16339121,16339586-16339713,
16340022-16340141,16340967-16341047,16341460-16341537,
16341616-16341708,16341880-16341934,16342795-16342871,
16343008-16343079,16343159-16343242,16343620-16343739,
16343824-16343892,16344721-16344798,16345684-16345822,
16345990-16346154,16346239-16346384,16346501-16346680,
16346834-16346922,16346997-16347028,16347120-16347226
Length = 810
Score = 48.4 bits (110), Expect = 6e-06
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 21/183 (11%)
Frame = +2
Query: 221 IRFTWNVWPSSRIEATRLVVPLACLYQPLK-ERPDLPPIQYE------PVLCTRNTCRAI 379
+R T N P + T +PL+ + QP P PIQ P+ C+R C+A
Sbjct: 97 MRCTVNQIPCTGDLLTTSGMPLSLMVQPFSLPHPSEEPIQLVDFGDMGPIRCSR--CKAY 154
Query: 380 LNPMCQVDYRAKLWVCNFCFQRNPFPPQY---AAISEQHQPAELIPNF--STIEYTITR- 541
+NP + + + ++CN C N P +Y + + A+ P T+E+ ++
Sbjct: 155 INPFMRFVDQGRRFICNLCGFSNDTPREYICNLGPDGRRRDADDRPELCRGTVEFVASKE 214
Query: 542 ---AQAMPPIYLLVVDTCLDEEELG---ALKDSLQTSLSLMPQ--NALVGLITFGKMVQI 697
MP +Y ++D ++ + G A ++ ++S +P+ +VG+ TF +
Sbjct: 215 FLVRDPMPAVYFFLIDVSMNAIQTGSTAAACSAISQAISDLPEGPRTMVGIATFDSAIHF 274
Query: 698 HEL 706
+ L
Sbjct: 275 YSL 277
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 16/146 (10%)
Frame = +2
Query: 221 IRFTWNVWPSSRIEATRLVVPLACLYQPLK-ERPDLPPIQYE------PVLCTRNTCRAI 379
+R T N P + T +PLA + QP P PIQ P+ C+R C+A
Sbjct: 379 MRCTLNQIPCTGDILTTSAMPLALMVQPFALPHPSEEPIQLVDFGGMGPIRCSR--CKAY 436
Query: 380 LNPMCQVDYRAKLWVCNFCFQRNPFPPQY---AAISEQHQPAELIPNF--STIEYTITR- 541
+NP + + K +VCN C N P +Y + + A+ P T+E+ ++
Sbjct: 437 INPFMRFIDQGKHFVCNLCGFSNDTPREYLCNLGPDGRRRDADDRPELCRGTVEFIASKE 496
Query: 542 ---AQAMPPIYLLVVDTCLDEEELGA 610
MP +Y ++D ++ + GA
Sbjct: 497 FLVRDPMPAVYFFLIDVSMNAIQTGA 522
>04_03_0866 +
20407242-20407575,20407665-20407724,20408298-20408351,
20408465-20408637,20408779-20408965,20409098-20409243,
20409316-20409470,20409888-20409969,20410073-20410188,
20410996-20411091,20411549-20411672,20412252-20412325,
20412820-20413068,20413527-20413738,20414170-20414381
Length = 757
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Frame = +2
Query: 311 ERPDLPPIQYEPVLCTR-NTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQ- 484
ER P E L R ++C A + +C + + W C C N P +A +
Sbjct: 36 ERGAAPATGAEGHLLPRCDSCYAYFSTLCPLHRWS--WSCAICSADNDLTPDASARYARD 93
Query: 485 --HQPAELIPNFSTIEYTITRAQAMP--PIYLLVVDTCLDEEELGALKDSLQTSLSLMPQ 652
P E+ F + +A P+Y+ +D EE L +K +L +L +P
Sbjct: 94 GGQDPPEMRSAFVDLLLPGEEGEAATTTPVYVAAIDLSSSEEFLELVKSALLAALEAIPP 153
Query: 653 NALVGLITFGKMVQIHEL 706
+L GL+TF + ++++
Sbjct: 154 GSLFGLLTFSSKIGLYDV 171
>05_05_0018 -
21547649-21547875,21547973-21548187,21548831-21549096,
21549534-21549657,21549946-21550041,21550179-21550294,
21550374-21550455,21550574-21550728,21550819-21551001,
21551114-21551305,21551389-21551564,21551676-21551729,
21552076-21552147,21552255-21552582
Length = 761
Score = 41.1 bits (92), Expect = 0.001
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Frame = +2
Query: 368 CRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPA--ELIPNFSTIEYTITR 541
C A LN C ++ W C C N F A QH EL +F +E +
Sbjct: 56 CWAYLNSHCDMERWG--WSCALCGTLNGFDDD-ALRRLQHPEGWPELTSSFVDLEIPVDG 112
Query: 542 AQAMP------PIYLLVVDTCLDEEELGALKDSLQTSLSLMPQNALVGLITFGKMVQIHE 703
++ P+Y+ VD EE L +K +L +L + +L GL+TF + +++
Sbjct: 113 SEGAGDGVQARPVYVAAVDLACSEEFLELIKSALLAALEALIPGSLFGLMTFSHKIGLYD 172
Query: 704 L 706
+
Sbjct: 173 V 173
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 40.3 bits (90), Expect = 0.002
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 14/173 (8%)
Frame = +2
Query: 224 RFTWNVWPSSRIEATRLVVPLACLYQPLKERPDLPPIQYEPVLCTRNTCRAILNPMCQVD 403
R T + P+S+ +R +PL + P+ I+ C R CR +NP
Sbjct: 318 RLTTHAIPASQSLVSRWHLPLGAVEVPVINFGSAGVIR-----CRR--CRTYINPYATFA 370
Query: 404 YRAKLWVCNFCFQRNPFPPQY-AAI--SEQHQPAELIPNFS--TIEYTITR----AQAMP 556
+ W CN C N P +Y I S + A+ P S T+E+ MP
Sbjct: 371 DAGRKWRCNLCTLLNDVPGEYFCGIDGSGRRYDADQRPELSKGTVEFVAPTEYMVRPPMP 430
Query: 557 PIYLLVVDTCLDEEELGALK---DSLQTSLSLMP--QNALVGLITFGKMVQIH 700
P Y ++D + G L+ ++++ L +P +G +TF + H
Sbjct: 431 PSYFFLIDVSVSAVRSGLLEVVAKTIKSCLDDLPGFPRTQIGFLTFDSTLHFH 483
>03_03_0266 -
16014740-16015045,16015566-16015601,16015623-16015643,
16016331-16016591,16017504-16018985,16019834-16019989,
16020154-16020277,16020399-16020615,16020877-16021774,
16022947-16023291,16023371-16023565,16023751-16024453,
16024866-16025467
Length = 1781
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 353 CTRNTCRAILNPMCQVDYRAKLWVCNFCFQRNPFPPQYAAISEQHQPAELIPNFSTIEYT 532
CT N+ A P +D K+ VCNFCF++ + + AA ++Q P L P+ S
Sbjct: 69 CTTNSIPASSGPDRNIDEGDKIRVCNFCFKQ--WEQERAAANKQMMPL-LSPSLSEASLF 125
Query: 533 ITRA 544
T++
Sbjct: 126 STKS 129
>03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495
Length = 728
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -1
Query: 181 CGHIADQKVMRRTSYKHMSKFLKSQYVFIQKSHKFL 74
C H+ D ++ TS KH L +++ ++ KFL
Sbjct: 653 CSHLDDGRISSMTSVKHEISLLNTRFTALETDQKFL 688
>01_02_0089 -
10997882-10997957,10998139-10998423,10998519-10998589,
10998685-10998761,10998858-10998963,10999062-10999189,
10999291-10999423,11000005-11000133,11000220-11000375,
11000770-11000846,11000938-11000998,11001249-11001383,
11001642-11001765,11001852-11001917,11002010-11002112,
11002603-11002652,11003795-11003895
Length = 625
Score = 29.1 bits (62), Expect = 4.1
Identities = 27/110 (24%), Positives = 50/110 (45%)
Frame = -1
Query: 460 RWKWVSLEAKVADP*FSSVIHLAHWVQYSSACISCTEYRLVLYRW*VGALLKRLVQASQR 281
R K V L K A F SV ++ + VQ + +S ++ +G+L L+ S
Sbjct: 513 RDKRVQLLQKYAHTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLSGSGM 572
Query: 280 HNKPRSLNST*WPYVPSEPYAIAVFILLDELLVCGHIADQKVMRRTSYKH 131
+K + ++ + Y +F+L + + GH DQK +++ Y+H
Sbjct: 573 FSK-QEIDE-----IVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRH 616
>06_01_0498 + 3570543-3571136,3579620-3580348
Length = 440
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 521 IEYTITRAQAMPPIYLLVVDTCLDEEELGAL 613
+ ++ T A+ PP L++ D CL E+ GA+
Sbjct: 81 LHHSTTAARHYPPSMLILADWCLPEQRRGAI 111
>03_06_0523 +
34499533-34499705,34499808-34499917,34500037-34500224,
34500984-34501451
Length = 312
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = +2
Query: 113 FKKFAHVFITGSPHDFLIGDM----ATYEEFIQQNEDRD 217
FK A+VF+ G P+D GD+ A Y E + N RD
Sbjct: 32 FKDSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRD 70
>06_03_0956 +
26296744-26297382,26297595-26297669,26298147-26298341,
26298426-26298559,26298713-26298779,26298985-26299043,
26299204-26299321,26299613-26299726,26299855-26299986,
26300076-26300492,26300904-26300954,26301303-26301373,
26302067-26302151,26302258-26302410,26302522-26302596,
26302755-26302844,26303953-26304000,26304081-26304195,
26305356-26305459,26305582-26305692
Length = 950
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -1
Query: 235 PSEPYAIAVFILLDELLVCGHIADQKVMRRTSYKHM-SKF---LKSQYVFIQKSHKFLNF 68
P+ PY ++F+ E L DQ+V RR KH+ +K+ L + V + HK +
Sbjct: 127 PALPYVKSLFLGWFEPLRDAIARDQEVQRRKRVKHVYAKYLLLLPADKVAVIVMHKMMGL 186
Query: 67 LETKQTGEA 41
L + + G A
Sbjct: 187 LMSSKDGVA 195
>02_04_0256 + 21331396-21332268
Length = 290
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +2
Query: 464 YAAISEQHQPAELIPNFSTIEYTITRAQAMPPIYLLVVDT 583
+ ++ H P++LI S + + +PP+ L++VD+
Sbjct: 122 HVLVAAAHSPSDLISLLSRAQRLLAHPGRLPPVRLILVDS 161
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,557,996
Number of Sequences: 37544
Number of extensions: 500767
Number of successful extensions: 1068
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2068401984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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